Halanaeroarchaeum sp. HSR-CO: HSRCO_0975
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Entry
HSRCO_0975 CDS
T09490
Symbol
sua7-3
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HSRCO_0975 (sua7-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hahs03021
]
HSRCO_0975 (sua7-3)
Transcription machinery [BR:
hahs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HSRCO_0975 (sua7-3)
Prokaryotic type
Archaeal type
TFB
HSRCO_0975 (sua7-3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Auto_anti-p27
Cas12f1-like_TNB
Zn_ribbon_tTFIIB
Trm112p
Motif
Other DBs
NCBI-ProteinID:
UWG47263
LinkDB
All DBs
Position
complement(937111..938058)
Genome browser
AA seq
315 aa
AA seq
DB search
MSHALRTTERDEQEKESTDGCPECGGLVVTDEEHGETVCADCGLVVEEDGIDRGPEWRAF
DSQEKDKKSRVGAPTTNTMHDKGLSTNIDWRDKDAYGNSLGSRQRQKMQRLRKWNERFRT
RDAKERNLKQALGEIDRMASATGLPDNVRETASVIYRRALEEDLLPGRSIEGVATSCVYA
AARQAGVPRSLDEIDDVSRVEKDEIARTYRYIVRELGLEVRPADPASYVPRFASELGLSD
ESQHRARELLENAKEKGVHSGKSPVGLAAAAVYAAALLTNEKTTQAKVSDVADISEVTIR
NRYHELLEAEDTIPV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgcactgagaacaaccgaacgagacgagcaggagaaagaatcgaccgacggc
tgcccggagtgtggcggcctggtagtaaccgacgaagagcacggcgagacggtctgtgcc
gactgtggcctcgtggtcgaggaggacggcatcgaccgtggtcccgagtggcgagccttc
gactcccaggagaaggacaagaaatcgcgcgtcggcgcgcccaccacgaacaccatgcac
gacaagggcctctcgaccaacatcgactggcgagataaggacgcctacgggaactccctc
ggctcgcgccagcgccagaagatgcagcgactgcgcaagtggaacgagcggttccgcacg
cgagacgccaaggagcgcaatctcaagcaggcactcggcgaaatcgaccggatggcctcc
gcgaccggcctccccgacaacgtccgcgagacggcctccgtcatctaccggcgtgcactc
gaggaggatctcctcccgggccggtccatcgagggcgtcgccacctcctgtgtctacgcc
gccgcccgccaggccggagtgccccgcagcctcgacgagatcgacgacgtcagccgcgtc
gagaaggacgagatcgctcgcacctaccgctacatcgtccgcgaactcggtctcgaagta
aggcccgccgaccccgcgagctacgttccgcgcttcgcctccgaactcgggctgagcgac
gagtcccagcaccgcgcccgcgagctcctcgagaacgccaaagagaagggcgtccacagc
ggcaagagcccggtcggcctcgccgcggccgccgtctacgccgccgccctcctcacgaac
gagaagaccacgcaggcgaaggtcagcgacgtcgccgacatctccgaggtcaccatccgg
aaccgctatcacgaactcctcgaggccgaagacaccatcccggtctga
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