Halanaeroarchaeum sp. HSR-CO: HSRCO_1021
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Entry
HSRCO_1021 CDS
T09490
Symbol
nusG
Name
(GenBank) Transcription antiterminator NusG
KO
K15172
transcription elongation factor SPT5
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
HSRCO_1021 (nusG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hahs03021
]
HSRCO_1021 (nusG)
03019 Messenger RNA biogenesis [BR:
hahs03019
]
HSRCO_1021 (nusG)
Transcription machinery [BR:
hahs03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
HSRCO_1021 (nusG)
RNA polymerase I system
HSRCO_1021 (nusG)
Messenger RNA biogenesis [BR:
hahs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
HSRCO_1021 (nusG)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW
Ribosomal_uL24m-like
KOW4_SPT5
SH3_KIN17_C
DUF6093
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
UWG47309
LinkDB
All DBs
Position
complement(986103..986540)
Genome browser
AA seq
145 aa
AA seq
DB search
MPIYAVKTTASQEQTVASMIANREEDEVHAVLAPESLTSYVMVEADGTPVLDRVLEDIPH
ARSVVPGESGIGEVEHFLSPKPDVEGIAEGDIVELIAGPFKGEKAQVQRIDESKDQVTVE
LYEATVPIPVTVRGDQIRVLDSDER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
gtgccgatctacgccgtcaagaccacggcgagccaggaacagactgtggccagcatgatc
gccaaccgcgaggaggacgaggtccacgccgtcctcgcgccggagtcgttgacgagttac
gtgatggtcgaggcggacgggacgccggtcctcgaccgcgtcctcgaggacatcccccac
gcccgctcggtcgtcccgggcgagagcggcatcggcgaggtcgagcacttcctctcgccg
aaacccgacgtcgaggggatcgccgagggcgacatcgtcgaactcatcgccggcccgttc
aagggcgagaaggcccaggtccagcgcatcgacgagagcaaagaccaggtcacggtcgaa
ctctacgaggcgacggtcccgattccggtcaccgtccgtggcgaccagatccgcgttctg
gacagcgacgaacggtag
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