Halanaeroarchaeum sp. HSR-CO: HSRCO_1074
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Entry
HSRCO_1074 CDS
T09490
Symbol
rpb9
Name
(GenBank) DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS
KO
K03057
transcription factor S
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hahs03021
]
HSRCO_1074 (rpb9)
Transcription machinery [BR:
hahs03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
HSRCO_1074 (rpb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_IS1595
Zn_Ribbon_TF
Zn_Ribbon_YjdM
DUF3797
Cas12f1-like_TNB
HalOD2
RUBY_RBDX
DUF7351
HypA
FdhE_central
Ribosomal_L37ae
ZnF_RZ-type
Mut7-C
Zn_ribbon_ISL3
Zn_ribbon_LapB
GpA_ATPase
DUF7575
DUF5795
Motif
Other DBs
NCBI-ProteinID:
UWG47362
LinkDB
All DBs
Position
complement(1041301..1041585)
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AA seq
94 aa
AA seq
DB search
MMRATDGVWECSNCGNTQVKDPDAEYVISEEQEVSEIIETGEGDSGLPTTDARCPECGND
RAYWYMQQIRAADESETRFFVCTECEHKWREDDH
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgggcgacggacggggtctgggagtgcagtaactgtgggaacacgcaagtcaag
gaccccgacgccgagtacgtcatctcggaggaacaggaggtcagcgagatcatcgagacc
ggggagggtgactccgggctcccgacgaccgacgcccggtgtccggagtgtggtaacgac
cgcgcctactggtacatgcaacagatccgcgcggcggacgaatccgagacgcgctttttc
gtctgtaccgagtgcgagcacaagtggcgcgaagacgatcactaa
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