Halanaeroarchaeum sp. HSR-CO: HSRCO_1243
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Entry
HSRCO_1243 CDS
T09490
Symbol
potD
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HSRCO_1243 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hahs02000
]
HSRCO_1243 (potD)
Transporters [BR:
hahs02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HSRCO_1243 (potD)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
UWG47527
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Position
complement(1205662..1206855)
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AA seq
397 aa
AA seq
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MDQRERAVDDGRGRFSPDTGSWTSRRAFLAGSSALAVSGLAGCLGGGSETTSELDPDDPP
EKPDSITVRAWGGVWQESLAAAIGDPFTEETGIDVVYDNSDIQVTQNNIRSAVDQGQAPP
VNVNWTVLVFMHREYLQGLAEPLHPDVVPHTEEMRELARPDVDGRLPYIGLYPYTYALGY
NEEVLESIQGDPEPVTSWETLWDDVYEGWLGMYNDPPADGFLPVLAELADVDLGPADEME
PLWDLVEDLAPNLGYLGSDSSILQNLQEGEIAYAAGYLPSNLLAAQNEGVPVGWTIPDEG
ATVRTDCMYTPKNQPLSERYWSQVFIDFALRAENQAQWMEGLQMPMLNENVDPLDWMADD
PAFPTAESDFDALIAPDLDVYAEHSPDWFDRISQTLE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggaccaacgcgaacgcgcagtcgacgacggacggggacggttctcccccgataccgga
tcgtggacgtcgcgacgagcattcctggcaggaagttccgccctcgccgtcagcggactg
gccggctgtctcggcggcggatcggagacgacgtccgaactggacccggacgacccacca
gagaagccggactcgatcaccgtgcgggcctggggcggcgtctggcaagagtcactcgcc
gcggcgatcggtgacccgttcaccgaagagaccggcatcgacgtcgtctacgacaacagc
gatatccaggtgacccagaacaacatccgatccgccgtcgaccagggacaggcaccaccg
gtcaacgtcaactggacggtcctcgtgttcatgcaccgcgagtacctgcaggggttggcc
gaaccactccatcccgacgtcgtgccccacacagaggaaatgcgagagctagcccgcccc
gacgtcgacggccgccttccgtacatcgggttgtacccctacacgtacgcgctcggctac
aacgaggaggtcctcgagtccatccagggggaccccgagccggtcacctcgtgggagaca
ctctgggacgacgtctacgaagggtggctcggaatgtacaacgacccaccggcagacggg
ttcctcccggtgctggcggaactggccgacgtcgacctcgggccagccgacgagatggaa
ccgctgtgggacctcgtcgaagacctcgcgccgaatctcggctacctcggtagcgactcc
tcgattttgcagaacttacaggagggtgaaatcgcctacgcggcggggtacctcccgagt
aacttgctcgcggcacagaacgagggtgtcccggtcgggtggacgataccggacgagggt
gcgacagtgcggaccgactgcatgtacaccccgaaaaaccagccactctccgaacggtac
tggagccaggtgttcatcgacttcgcgctgcgagccgagaatcaagcgcagtggatggag
ggactccagatgcccatgctcaacgagaacgtcgacccgctcgactggatggcggacgat
ccggcgttccccaccgccgaatcggatttcgacgccctcatcgcacccgacctcgacgtg
tacgccgaacacagcccggactggttcgacagaatttcccaaaccctcgaataa
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