Halanaeroarchaeum sp. HSR-CO: HSRCO_1501
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Entry
HSRCO_1501 CDS
T09490
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hahs03400
]
HSRCO_1501 (phrB)
Enzymes [BR:
hahs01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HSRCO_1501 (phrB)
DNA repair and recombination proteins [BR:
hahs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HSRCO_1501 (phrB)
Prokaryotic type
HSRCO_1501 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
UWG47783
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All DBs
Position
1440310..1441728
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AA seq
472 aa
AA seq
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MSDSADVTLFWHRRDLRTIDNAGLDRATAHGSVVPIFCLDDDILQYAGRPRVRFMLEALR
DLRKRYRDLGTDLIVVHGDPSVQIPAVAAEYDADTVVWNDDYSGLAQERDESVEDALLSA
GFDVDWVQDLVLHEPGSIRTSNGDPYSVFSYYWKKWQDREKESSYACPEADAFVGVSGNP
IPGLEELGFEQPDASIPDGTRQAAIDRLRAFIEDPIFSYSDCRDVPAEACTSRLSQDLKF
GLVGIREVYEATERAKSSASSSEDRESVREFQRQLAWREFYAQVLTYSPETVTENFKSYT
NPISWKRDEDALDAWKRGQTGYPIVDAGMRQLLAEGYMHNRVRMIVASFLTKDLLVDWRE
GYRWFRDRLVDHDTANDVGGWQWAASTGTDAQPYFRIFNPMTQGERYDPEAQYITEYVEE
LRNVDAEIIHDWTDLSPTQREANAPAYPAPIVDHAARREAAIAMFERARADD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattcggccgacgtgacgttgttctggcatcgtcgtgatcttcgaacgatcgat
aatgctggcctcgaccgggcgacagcccacgggtcggtggtgccgatattctgtctcgac
gacgatatcctccagtatgccgggcgcccccgggtcagattcatgctcgaggcccttcga
gacctccgcaagcgatatcgtgacctgggaacggatctgatcgtcgttcacggagacccg
agcgtccagattccagcggtcgcagcggaatacgacgcagacaccgtcgtgtggaacgac
gattactccggactcgcccaggagcgagacgaatcggtcgaggacgcactcctctctgcc
ggcttcgacgttgactgggtacaagacctcgtcctccacgaaccgggttcgatccggacc
tcgaatggtgacccgtactccgtcttctcgtactactggaagaagtggcaagaccgtgag
aaagaatcctcgtatgcttgtccagaggccgacgcattcgttggggtctctggtaatccg
ataccaggactcgaggaactgggattcgagcaacccgacgcttcgattcccgacggaact
cgccaggccgcaatcgaccgacttcgggcgtttatcgaggatccgattttctcgtatagc
gactgtcgagacgtccccgccgaagcgtgcacctcacgactgtcacaggatctcaagttc
gggcttgtggggatccgcgaggtgtacgaggcgaccgaacgggcgaagtcgtcggccagc
tcgtcggaagaccgtgagtccgtccgcgagttccagcgccaactcgcctggcgggaattc
tacgcccaggttctgacgtacagcccagagaccgtgaccgagaatttcaagtcctacacg
aacccgatttcgtggaaacgagacgaggacgccctcgatgcctggaaacgagggcagacg
gggtaccccatcgtcgacgctggcatgcgacaattactggcagaaggatacatgcacaac
cgggtccgcatgatcgtcgcctcgtttctcaccaaagacctgctcgtggactggcgagaa
gggtaccggtggttccgtgatcgtctcgtggatcacgatacagcgaacgacgtcggtggg
tggcagtgggcggcatccacgggaaccgacgcccagccgtactttcgcatcttcaacccc
atgacacagggcgagcgctacgatcccgaagcgcagtatatcaccgaatacgtcgaagaa
ctccggaatgtcgacgctgaaataatccacgactggactgacctgtctcccactcaacgg
gaggcgaacgccccggcgtatccagcgcccatcgtcgaccacgcggcccgcagagaagcg
gcgattgcgatgttcgaacgcgcgagggcggacgattaa
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