Halanaeroarchaeum sp. HSR-CO: HSRCO_1593
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Entry
HSRCO_1593 CDS
T09490
Symbol
fen1
Name
(GenBank) 5'-3' exonuclease
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03030
DNA replication
hahs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HSRCO_1593 (fen1)
03410 Base excision repair
HSRCO_1593 (fen1)
03450 Non-homologous end-joining
HSRCO_1593 (fen1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hahs03032
]
HSRCO_1593 (fen1)
03400 DNA repair and recombination proteins [BR:
hahs03400
]
HSRCO_1593 (fen1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hahs04147
]
HSRCO_1593 (fen1)
DNA replication proteins [BR:
hahs03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
HSRCO_1593 (fen1)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
HSRCO_1593 (fen1)
DNA repair and recombination proteins [BR:
hahs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
HSRCO_1593 (fen1)
Exosome [BR:
hahs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HSRCO_1593 (fen1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
DUF7291
Phasin
Motif
Other DBs
NCBI-ProteinID:
UWG47873
LinkDB
All DBs
Position
1530216..1531319
Genome browser
AA seq
367 aa
AA seq
DB search
MNYFESLNSNTPPVPFLVLLRPVPRSQPRRLNHGPYNITTMGNADLRQLAVIEEVSFDDL
DGDVVAVDAHNWLYRYLTITVKFTNESVYTTSAGEEVANLIGIVQGLPKFFENDLTPVFV
FDGSVTELKAEEIEDRREAKAAAEEKLAEAREAGDAIAAARFESRTQRLTETIHETTRGL
LDRLDVPYIEAPAEGEAQAAYMARTDEAVDYAGSEDYDTLLLGAPVTLRKLTTRGNPERM
DFQQTLAEHDITWEQLVDVAILIGTDFNDGLAGFGPKTALSSIHEHGDLFAVLEAEGVEI
EQAEAIRQLFLDPEVTDAYDVDYDLNPDIDAAKAYVTEQYEVPADEVERGFERIEESVTQ
TGLDRWT
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaattacttcgaatccctcaatagtaatactcctcctgtcccatttttagtactcctc
cgaccagtaccacggtcacaacctcgacggttaaatcacgggccatacaatatcaccacg
atgggaaacgctgacctccggcaattggccgtaatcgaggaggtgtccttcgacgacctc
gacggagacgtcgtcgccgtcgacgcgcacaactggctgtatcggtatctcacgatcacg
gtcaagttcacgaacgagtccgtctacacgacgagcgcgggcgaggaggtcgccaacctg
atcggtatcgtccagggcctcccgaagttcttcgagaacgacttgacgccggtcttcgtc
ttcgacgggagcgtcacggaactcaaagccgaagagatcgaggatcgtcgagaagccaaa
gcagctgcggaggagaaactcgccgaggcccgggaggcaggtgacgcgatagcggcggcc
cggttcgaatccagaacccagcgactcacggagacgatccacgagacgacccggggatta
ctcgaccgactcgacgtgccctacatcgaggcacccgccgagggtgaggcacaggcggcg
tacatggcccgaaccgacgaagctgtcgactacgccggaagcgaggattacgacacgctc
ctgctgggtgcccccgtgacgctcaggaaactcacgaccaggggcaatccggaacgaatg
gacttccagcagaccctcgcggaacacgacatcacctgggaacaactcgtcgacgtcgcc
atcctgatcgggaccgatttcaacgacggactcgccgggttcggtccgaagaccgcgctc
tcttcgatccacgagcacggcgacctcttcgcggtcctcgaggccgagggcgtcgagatc
gaacaggccgaagcgattcggcagctgttcctcgaccccgaggtgaccgacgcctacgac
gtcgactacgatctgaatcccgacatcgatgcggcgaaggcgtacgtgaccgagcagtac
gaggttccggcagacgaggtcgaacgcgggttcgagcggatcgaggagtcagtgacacag
accgggctggatcgctggacctga
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