KEGG   Halanaeroarchaeum sp. HSR-CO: HSRCO_1593
Entry
HSRCO_1593        CDS       T09490                                 
Symbol
fen1
Name
(GenBank) 5'-3' exonuclease
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
hahs  Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03030  DNA replication
hahs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hahs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HSRCO_1593 (fen1)
   03410 Base excision repair
    HSRCO_1593 (fen1)
   03450 Non-homologous end-joining
    HSRCO_1593 (fen1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hahs03032]
    HSRCO_1593 (fen1)
   03400 DNA repair and recombination proteins [BR:hahs03400]
    HSRCO_1593 (fen1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hahs04147]
    HSRCO_1593 (fen1)
DNA replication proteins [BR:hahs03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    HSRCO_1593 (fen1)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     HSRCO_1593 (fen1)
DNA repair and recombination proteins [BR:hahs03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     HSRCO_1593 (fen1)
Exosome [BR:hahs04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   HSRCO_1593 (fen1)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc DUF7291 Phasin
Other DBs
NCBI-ProteinID: UWG47873
LinkDB
Position
1530216..1531319
AA seq 367 aa
MNYFESLNSNTPPVPFLVLLRPVPRSQPRRLNHGPYNITTMGNADLRQLAVIEEVSFDDL
DGDVVAVDAHNWLYRYLTITVKFTNESVYTTSAGEEVANLIGIVQGLPKFFENDLTPVFV
FDGSVTELKAEEIEDRREAKAAAEEKLAEAREAGDAIAAARFESRTQRLTETIHETTRGL
LDRLDVPYIEAPAEGEAQAAYMARTDEAVDYAGSEDYDTLLLGAPVTLRKLTTRGNPERM
DFQQTLAEHDITWEQLVDVAILIGTDFNDGLAGFGPKTALSSIHEHGDLFAVLEAEGVEI
EQAEAIRQLFLDPEVTDAYDVDYDLNPDIDAAKAYVTEQYEVPADEVERGFERIEESVTQ
TGLDRWT
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgaattacttcgaatccctcaatagtaatactcctcctgtcccatttttagtactcctc
cgaccagtaccacggtcacaacctcgacggttaaatcacgggccatacaatatcaccacg
atgggaaacgctgacctccggcaattggccgtaatcgaggaggtgtccttcgacgacctc
gacggagacgtcgtcgccgtcgacgcgcacaactggctgtatcggtatctcacgatcacg
gtcaagttcacgaacgagtccgtctacacgacgagcgcgggcgaggaggtcgccaacctg
atcggtatcgtccagggcctcccgaagttcttcgagaacgacttgacgccggtcttcgtc
ttcgacgggagcgtcacggaactcaaagccgaagagatcgaggatcgtcgagaagccaaa
gcagctgcggaggagaaactcgccgaggcccgggaggcaggtgacgcgatagcggcggcc
cggttcgaatccagaacccagcgactcacggagacgatccacgagacgacccggggatta
ctcgaccgactcgacgtgccctacatcgaggcacccgccgagggtgaggcacaggcggcg
tacatggcccgaaccgacgaagctgtcgactacgccggaagcgaggattacgacacgctc
ctgctgggtgcccccgtgacgctcaggaaactcacgaccaggggcaatccggaacgaatg
gacttccagcagaccctcgcggaacacgacatcacctgggaacaactcgtcgacgtcgcc
atcctgatcgggaccgatttcaacgacggactcgccgggttcggtccgaagaccgcgctc
tcttcgatccacgagcacggcgacctcttcgcggtcctcgaggccgagggcgtcgagatc
gaacaggccgaagcgattcggcagctgttcctcgaccccgaggtgaccgacgcctacgac
gtcgactacgatctgaatcccgacatcgatgcggcgaaggcgtacgtgaccgagcagtac
gaggttccggcagacgaggtcgaacgcgggttcgagcggatcgaggagtcagtgacacag
accgggctggatcgctggacctga

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