Halanaeroarchaeum sp. HSR-CO: HSRCO_1658
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Entry
HSRCO_1658 CDS
T09490
Symbol
sua7-5
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HSRCO_1658 (sua7-5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hahs03021
]
HSRCO_1658 (sua7-5)
Transcription machinery [BR:
hahs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HSRCO_1658 (sua7-5)
Prokaryotic type
Archaeal type
TFB
HSRCO_1658 (sua7-5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Trm112p
Zn_ribbon_RRN7
Auto_anti-p27
DZR
YopD
Cas12f1-like_TNB
Cyclin_C
DZR_2
Zn_ribbon_3
Cyclin_N
Zn_ribbon_LysW
A2L_zn_ribbon
Lar_restr_allev
Zn_ribbon_NUD
Sigma70_r4
DUF1272
Motif
Other DBs
NCBI-ProteinID:
UWG47937
LinkDB
All DBs
Position
1596291..1597355
Genome browser
AA seq
354 aa
AA seq
DB search
MVHQRVLEAATINAKMTDQDEGNDRTRVRERATAETDEEERTERERDEREQICPECGGRL
VTDEERGEVVCSECGLVVEEDEIDRGPEWRAFDAAERDEKSRVGAPTTKMMHDEGLSTTI
GWQDRDAAGRMLSSRQRQKMQRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLSHNV
REMASVIYRRALDEDLLPGRSIEGVATASLYAAARQTGTPRSLDEVATVARVDRDEIART
YRYVARELSLEVEPADPAQYVPRFASALGVSDAVEREAKRLLATARETGQTSGKSPVGLA
AAAVYAGAILANERVTQSEVSEVSNVSEVTIRNRYHELLEIQAERSDEQSSRSE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtggttcaccagcgagtgctcgaggcggccaccataaacgccaaaatgaccgatcaggac
gaggggaatgatcgcacgcgggtccgagagcgagcgactgccgaaacggacgaggaggaa
cggacagagcgggaacgtgacgagcgcgaacagatttgcccggagtgtggcggccgtctc
gtaaccgacgaggagcggggcgaagtcgtctgttcggagtgtggactcgtcgtcgaggag
gacgagatcgaccgggggccggagtggcgagccttcgacgccgccgaacgcgacgagaaa
tcccgcgtcggcgcaccgacgaccaagatgatgcacgacgaggggctctcgacgaccatc
ggctggcaagaccgtgacgccgccggtcgaatgctctcctcgcgccagcgccagaagatg
cagcggctgcgaacgtggaacgagcgcttccgaacgcgcgattcgaaagaacgcaacctc
aaacaggccctcggcgagatcgaccggatggcatcggccctcggcctctcccacaacgtc
cgggagatggcatcggtcatctaccgacgggcgctcgacgaagacctcctcccgggccgg
tctatcgagggtgtcgcgaccgcatcgctgtacgccgccgctcggcagacgggaacgcca
cgcagtctggacgaagttgcgacggtcgcccgcgtcgatcgggacgagatcgccaggacc
tatcggtacgtcgcccgcgaactctcactcgaggtagaacccgccgatcccgcccagtac
gtcccgcgattcgcgtctgcccttggagtctcagacgccgtcgaacgggaggcgaaacga
ctgctggcgacggccagggagacgggtcagaccagcgggaagagtccggtcggcctggcc
gcagccgccgtttacgcgggggctatcctcgcgaacgagcgggtgacccagagcgaagtg
agcgaggtgtccaacgtctcggaggtcaccatccggaaccgctaccacgaactgctcgag
atacaggcagagcgatcggacgagcagtcgtccaggagtgagtga
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