Halanaeroarchaeum sp. HSR-CO: HSRCO_1902
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Entry
HSRCO_1902 CDS
T09490
Symbol
sua7-6
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HSRCO_1902 (sua7-6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hahs03021
]
HSRCO_1902 (sua7-6)
Transcription machinery [BR:
hahs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HSRCO_1902 (sua7-6)
Prokaryotic type
Archaeal type
TFB
HSRCO_1902 (sua7-6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Zn_ribbon_tTFIIB
SelR
Trm112p
Zn_ribbon_3
Ribosomal_S27
DZR
Zn_ribbon_RPB9
DUF8054_C
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
UWG48180
LinkDB
All DBs
Position
1834763..1835794
Genome browser
AA seq
343 aa
AA seq
DB search
MSANTHAYDGGQGLQTRDPSVQNESIESESDKEETTARIRNECPECGGHLEQDAEHGETV
CGECGLVVEEDGIDRGPEWRAFNSTERTEKSRVGAPTTKMLHDEGLSTNIGWQNKDAYGR
SLSSRQRRKMQRLRTWDERFRTRNHKERNLKQALGEIDRMGSALGLPKDVRETASVIYRR
ALAEDLLPGRTIEGVATAALYAAARQADRPRSLDEVAAVSRVERMEFKRTYRYIVRELSL
PVKPADPQQYVARIVSAADASDETAHRARELLRTASGTGVFNGKSPVGLAAAAIYAAGLL
TDEGLTQSVISEAADVSEVTIRNRYQELLAVAEDADDAVTASA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcaaatacccacgcatacgacggcggacaggggctgcaaacccgcgatccgtcg
gtacagaacgaatcgatcgagagcgagtcggacaaagaggagacgaccgctcgaatccga
aacgagtgtcccgagtgtggcggtcacctcgagcaggacgccgaacacggcgagactgtc
tgtggcgagtgtggcctcgtcgtcgaagaggacggcatcgaccgcggccccgagtggaga
gccttcaacagcacggaacggacagaaaagtcccgcgtcggcgcaccgacgaccaagatg
ctccacgacgagggcctctcgaccaacatcggctggcagaacaaggacgcctacggccgg
tcgctctcgagccgccagcgtcgcaagatgcagcggctccgaacctgggacgagcggttc
cgcacccgaaaccacaaggaacggaacctcaagcaggccctcggcgagatcgaccggatg
gggagcgccctgggcctcccgaaggacgtccgcgagaccgcctcggtgatctaccgacgg
gcgcttgcggaggacctcctgcccgggcgaaccatcgagggcgtggccacggccgcgctg
tacgcggcggcccggcaggccgaccgaccacggagtctcgacgaggtcgctgcggtcagc
cgcgtcgagcggatggagttcaagcggacctaccgatacatcgtccgggaactctcgttg
ccggtcaagccggccgacccccagcagtacgtcgcccgcatcgtcagtgcggccgacgcg
agcgacgagaccgcccaccgggcgcgagaactactccggacggcgtccgggacgggcgtg
ttcaacggaaagagcccggtcggcctcgccgcggccgccatctacgcggccggcctgctc
accgacgaaggcctgacacagagtgtcatctccgaggcggcagacgtgagcgaggtaacg
atccggaaccggtatcaggaactgctcgccgtcgccgaagacgccgacgacgccgtcacg
gcgagcgcataa
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