Halanaeroarchaeum sp. HSR-CO: HSRCO_2360
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Entry
HSRCO_2360 CDS
T09490
Symbol
truB
Name
(GenBank) Pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hahs03016
]
HSRCO_2360 (truB)
Enzymes [BR:
hahs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HSRCO_2360 (truB)
Transfer RNA biogenesis [BR:
hahs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HSRCO_2360 (truB)
Prokaryotic type
HSRCO_2360 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
UWG48625
LinkDB
All DBs
Position
complement(2247485..2248360)
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AA seq
291 aa
AA seq
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MPHLRDAPDDRDPEALLEFGVLNLDKPPGPSAHQVSAWIRDSVGVEKAAHAGTLDPKVTG
CLPVLLGAGTRLVPALLEGAKSYVAVLELHDDPPADLESVVAEFEGEIYQKPPKKSAVAR
RLRTRTIHDLDVLEVADRQALLDIRCESGTYVRKLCHDVGLALGTGAHMGDLRRTGTDPF
DDTDLVTLHDLADALAVWRDDGDDEWLREVVHPAERALTHIPSVTIAPSAAEEVAEGAPV
YAPGVIDADDAPEDSLVACYTPNGAAVCLGRLVGDADADEGLVVDLERVLV
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccacaccttcgcgacgcaccggacgaccgcgatcccgaggcgctactcgagttcggc
gtcctcaacctcgacaaaccgcccggcccgtcggcccaccaggtctcggcctggatccgc
gactcggtcggcgtcgagaaggctgctcacgccggaacgctcgacccgaaggtcaccggc
tgtctcccggtcctgctcggtgcgggaacccgcctcgtccccgcgctcctggaaggcgcg
aagtcgtacgtggccgtcctcgaactccacgacgacccgccggccgatctggaatcggtc
gtcgccgagttcgagggcgagatctaccagaagcccccgaagaagagcgccgtcgcacgc
cgcttgcgcacccggacgattcacgacctcgacgtcctcgaggtggcagatcgccaggcg
ctgctcgacatccggtgtgagagcgggacctacgtccggaagctttgccacgacgtcggg
ctggcgctggggaccggcgcccacatgggcgacctgcgccgcaccggcaccgaccccttc
gacgacaccgacctggtcacgctgcacgacctcgccgacgccctggccgtctggcgagac
gacggggacgacgagtggcttcgcgaggtcgtccatcccgcggagcgggcgctgacacac
atcccgagcgtgaccatcgcgccgagtgccgccgaagaggtcgccgagggcgcgccggtc
tacgcccccggcgtcatcgacgcggacgacgctcccgaggacagtctcgtggcctgttac
accccgaacggggccgccgtctgcctgggccggctggttggcgacgcggacgccgacgag
ggactggtcgtcgacctggaacgggtactggtgtag
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