Halanaeroarchaeum sp. HSR-CO: HSRCO_2685
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Entry
HSRCO_2685 CDS
T09490
Name
(GenBank) Topoisomerase DNA binding C4 zinc finger fused to uncharacterized N-terminal domain often associated with RecB-like endonuclease
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hahs03032
]
HSRCO_2685
03400 DNA repair and recombination proteins [BR:
hahs03400
]
HSRCO_2685
Enzymes [BR:
hahs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HSRCO_2685
DNA replication proteins [BR:
hahs03032
]
Prokaryotic type
DNA Topoisomerases
HSRCO_2685
DNA repair and recombination proteins [BR:
hahs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HSRCO_2685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
Auto_anti-p27
HypA
Zn_ribbon_6
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
UWG48941
LinkDB
All DBs
Position
complement(2551515..2552234)
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AA seq
239 aa
AA seq
DB search
MQQSIRVYAGRCTVSENDATQDGEVVALVKPDNTVLVHDASGYQPAAWLTRADAVQVERD
EGGFRLRARKGGDSLSLSGESVGHAEFTVSPAGPRVGTCPTCDAALVRERGAVTCIGCAD
SFPLPRDATITDDTCEDCGLPTLSVERGDHFEVCLDRTCESLDEVVRDRFAGRWTCPTCE
GNLAIERNRGLRATCEECGRSHVVPSGIVSDPCACGLPTFETTDGPRCLDPACEATGAH
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaatccatccgggtgtacgccgggcgctgtaccgtctccgagaacgatgcgacc
caggacggcgaggtcgtggcgctcgtgaagccggacaacaccgtgctcgtccacgacgcg
agtggctaccagccggcggcgtggctcacgcgcgccgacgcggtccaggtcgaacgcgac
gagggcggcttccgactccgcgcccgcaagggtggtgactccctctcgctatccggcgag
tcagtcggccacgcggagttcaccgtctcgcccgccggcccgcgggtcggcacctgtccg
acctgcgatgcggccctcgtccgcgaacggggcgcggtcacctgcatcggctgtgcggat
tcgttcccgctcccccgggacgcgaccatcaccgacgacacctgcgaggactgcgggctg
ccgacgctctccgtggagcgcggcgaccacttcgaggtctgtctggaccggacctgcgag
tccctcgacgaggtcgtgcgcgaccgcttcgcggggcggtggacctgcccgacgtgcgag
ggcaacctcgccatcgaacgcaatcgtgggctccgggccacctgcgaggagtgcggtcgc
tcccacgtcgtcccgagcggcatcgtctccgatccctgtgcgtgtggcctcccgaccttc
gagaccaccgatggcccacgctgtctcgaccccgcctgcgaggcgacaggggcacattga
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