Halanaeroarchaeum sp. HSR-CO: HSRCO_2814
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Entry
HSRCO_2814 CDS
T09490
Symbol
ffh
Name
(GenBank) Signal recognition particle GTPase
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs02024
Quorum sensing
hahs03060
Protein export
hahs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
HSRCO_2814 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HSRCO_2814 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HSRCO_2814 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hahs02044
]
HSRCO_2814 (ffh)
Enzymes [BR:
hahs01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
HSRCO_2814 (ffh)
Secretion system [BR:
hahs02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
HSRCO_2814 (ffh)
Eukaryotic Sec-SRP protein
HSRCO_2814 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
nSTAND3
CbiA
Zeta_toxin
SMC_N
ArsA_ATPase
AAA_18
AAA_22
APS_kinase
cobW
ResIII
AAA_33
AAA_24
KTI12
AAA_16
PRK
DUF2336
DsrH
DUF4618
Motif
Other DBs
NCBI-ProteinID:
UWG49070
LinkDB
All DBs
Position
2682087..2683469
Genome browser
AA seq
460 aa
AA seq
DB search
MVLDDLGSSLRGTLDKLRGKSRISEEDVDEVVKEIQRSLLQADVDTGLVMALSEDIKSRA
LDEEPPGGTTARDHVLRIVYEELVALVGDSTELPLEEQTILLAGLQGSGKTTTAAKMAWW
FSKKGLRPAVIQTDTFRPGAYDQAKQMAESAEVSFYGDPDEDDPVTIAREGLEATSEAEV
HIVDTAGRHALEEDLIDEIEEIEATVDPDNRLLVLDAAIGQGAKEQAQRFDDAIGIDGVV
ITKLDGTAKGGGALTAVNETGSTIAFLGSGETVQDIERFEPSGFISRLLGMGDLKQLTER
VERAMQETEAEEEDWDPEDMLQGEFTLKDMRHQMKAIDRMGPLGQVMDMIPGMGGNVMDQ
LPDDAMDVTQERMRSFDVIMDSMTEGELENPRSIGQSRTERIARGSGTTEDDVRELLEQY
RMMSRAIKQFQGMGDSDMQRMMKQMEGGGDMGDLGGNGPF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggtactcgacgacctcgggagttccctgcgggggacactcgacaaactccgtgggaag
tcccgcatcagcgaggaggacgtcgacgaggtcgtcaaggagatccagcggtcgctgctc
caggccgacgtcgacacgggcctcgtcatggcgctctccgaggacatcaaatcccgggcc
ctcgacgaggaaccgcccggcgggaccaccgccagggaccacgtcctccggatcgtctac
gaagaactcgtcgccctcgtcggcgactccaccgagctaccgctcgaagagcagaccatc
ctgctcgccggcctccaggggtcggggaagaccacgaccgccgccaagatggcctggtgg
ttctcgaagaagggactgcgccccgcggtcatccagaccgacaccttccgccccggcgcg
tacgaccaggccaagcagatggccgaatccgccgaggtctccttctacggcgatccggac
gaggacgaccccgtcaccatcgctcgcgagggactcgaggcgacgagcgaggccgaggtc
cacatcgtcgacaccgccggtcgccacgccctcgaagaagatctcatcgacgagatcgag
gagatcgaggcgacggtcgacccggacaaccggctgctcgtcctcgacgcggccatcggc
cagggtgccaaagagcaggcccagcggttcgacgacgccatcggcatcgacggcgtcgtc
atcaccaaactcgacgggacggccaagggtggcggggcgctgaccgccgtcaacgagacg
ggctcgaccatcgcgttcctcgggtcgggcgagaccgtccaggacatcgaacgcttcgag
ccctcggggttcatctcccggctcctcggcatgggggacctgaaacagctcaccgagcgc
gtcgagcgcgcgatgcaggagaccgaagccgaagaggaggactgggacccggaggacatg
ctccagggcgagttcaccctcaaggacatgcgccaccagatgaaggccatcgaccgcatg
ggcccgctggggcaggtcatggacatgatcccggggatgggcggcaacgtcatggaccag
ttgcccgacgacgcgatggacgtcacccaggaacggatgcgctcgttcgacgtcatcatg
gactcgatgaccgagggggaactcgagaacccgcgctccatcggccagagccgcacggag
cgtatcgcccgcggcagcgggaccaccgaggacgacgtcagggagttgctcgagcagtac
cggatgatgtcccgcgccatcaagcagttccaggggatgggcgacagcgatatgcagcgg
atgatgaaacagatggaaggcggcggcgacatgggcgacctgggcggcaacggtccgttc
tga
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