Halanaeroarchaeum sp. HSR-CO: HSRCO_2886
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Entry
HSRCO_2886 CDS
T09490
Name
(GenBank) Transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
hahs
Halanaeroarchaeum sp. HSR-CO
Pathway
hahs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hahs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HSRCO_2886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hahs03021
]
HSRCO_2886
Transcription machinery [BR:
hahs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
HSRCO_2886
Prokaryotic type
Archaeal type
TFB
HSRCO_2886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR_2
FYVE
Auto_anti-p27
RB_B
DZR
zf-C2HC_3
Zn_ribbon_6
Trm112p
Motif
Other DBs
NCBI-ProteinID:
UWG46498
LinkDB
All DBs
Position
complement(184983..185837)
Genome browser
AA seq
284 aa
AA seq
DB search
MSATNANSCPECSGPLQTDQTETVCKQCGLVVAEDRIDHGPEWRSFSDGPNRERTGAPLT
RSRHDRGLSTEIGRSSRLKGRKRRRVARMRTQHDRSRVSSTAERNQIYAFTEIRRLTGAL
SLPRSVRDQACVLFDSAQDDDLLRGRSLEGFAAATVYAVCRTNGLARTMGEIADAARAAE
RELQIAYDAMNRELGLQTGPIRPRTYLPRFASDLDLSAAVERDARSILEAGSRAVGGRNP
GGVAAAGLYLAAEDTDEQITQAAAADAAGVSAVTVRSAIDALRD
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaccaacgcgaactcgtgcccggagtgctccgggccgttgcagacggaccag
accgagacggtgtgcaagcagtgcggcctcgtcgtggcggaggaccgcatcgaccacggc
ccggagtggcgaagtttctctgacggtccgaaccgcgaacggaccggagcgccgctgacc
cggtcccgtcacgaccgcggcctgtccacggagatcggccgatcgagtcggctgaaggga
cgcaaacggcgacgggtcgcccggatgcggacccagcacgaccgctctcgggtctcttcg
accgccgagcgcaaccagatatacgccttcaccgagattcgtcggttgaccggagcgctc
tcgctcccgcgaagcgtccgcgatcaggcctgtgtcctcttcgactcggcacaggacgac
gacctcctgcgagggcggtccctcgaggggttcgccgcggcgaccgtctacgcggtctgc
cggacgaacgggctggcgcgaacgatgggtgagatagcggacgccgcccgcgcggcggag
cgggaactccagatcgcctacgacgcgatgaaccgggagctcgggctgcagaccggaccg
atccggccgcgtacgtacctcccccggttcgcctccgacctcgacctctcggccgccgtc
gaacgcgacgctcggtcgattctcgaggctggcagtagggcagtcggcggccgaaatccc
ggcggcgtcgctgcagcgggcctctacctggcagccgaagacacggacgaacagatcaca
caggctgcagcggccgatgcggccggcgtgagcgcagtcaccgttcgaagcgcgatcgac
gcgttacgcgactga
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integrated database retrieval system
