Hipposideros armiger (great roundleaf bat): 109373086
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Entry
109373086 CDS
T04661
Symbol
DDX39B
Name
(RefSeq) spliceosome RNA helicase DDX39B
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
hai
Hipposideros armiger (great roundleaf bat)
Pathway
hai03013
Nucleocytoplasmic transport
hai03015
mRNA surveillance pathway
hai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109373086 (DDX39B)
09122 Translation
03013 Nucleocytoplasmic transport
109373086 (DDX39B)
03015 mRNA surveillance pathway
109373086 (DDX39B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hai03019
]
109373086 (DDX39B)
03041 Spliceosome [BR:
hai03041
]
109373086 (DDX39B)
Enzymes [BR:
hai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109373086 (DDX39B)
Messenger RNA biogenesis [BR:
hai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109373086 (DDX39B)
Spliceosome [BR:
hai03041
]
Complex C
Other components
EJC/TREX
109373086 (DDX39B)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109373086 (DDX39B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
109373086
NCBI-ProteinID:
XP_019482220
UniProt:
A0A8B7Q079
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI
VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC
HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA
RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKVIRPVCR
KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF
NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPEEIDI
SSYIEQTR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaacgatgtggacaatgagctcttggactatgaagatgatgaggtggagaca
gcagctgggggagacggggctgaggcccctgccaagaaggatgttaagggctcctatgtc
tccatccatagctctggctttcgtgacttccttctcaagccagagttgctccgggccatt
gttgactgtggctttgagcatccatcagaagtccagcatgagtgtatccctcaggctatt
ctgggaatggacgtcctctgccaagccaagtcaggcatgggaaagacagcggtgtttgtg
ctggccacactgcaacagctggagccagttactgggcaggtgtctgtgctggtgatgtgt
cacactcgggaattggcttttcagatcagcaaggagtatgagcgcttctctaagtacatg
cccaatgtcaaggttgccgtgttttttggtggtctgtctatcaagaaggatgaagaggtg
ctgaagaagaactgcccgcatattgtcgtggggacccctggccgcatcctggccctggct
cgaaataagagcctcaacctcaaacacattaaacactttattttggatgaatgtgataag
atgcttgaacagctcgacatgcgtcgggatgtccaggaaatttttcgcatgacccctcac
gagaagcaggtcatgatgttcagtgctaccttgagcaaagtgatccgcccagtgtgccgc
aagttcatgcaagacccaatggagatcttcgtggatgatgagacgaagctgacgctgcat
gggttgcagcagtactacgtgaaactgaaggacaacgaaaagaaccggaagctctttgac
cttctggatgtacttgagttcaaccaggtggtgatctttgtgaagtctgtgcagcgctgc
atcgccctggcgcagctcctggtggagcagaacttcccggccatcgccatccaccgcggg
atgccccaggaggagcggctttctcggtatcagcagtttaaagattttcaacgacggatt
cttgtggccaccaacttgtttggccgaggcatggacatcgagcgggtcaacattgccttc
aactatgacatgcccgaggattccgacacctacctgcatcgggtggccagagcaggccga
tttggcaccaagggtttggccatcacgtttgtgtcagatgagaacgatgccaagatcctg
aatgacgtgcaggaccgctttgaggtcaatattagtgagctgcccgaggagatcgacatc
tcctcctacattgaacagacacggtag
DBGET
integrated database retrieval system
