Hipposideros armiger (great roundleaf bat): 109382807
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Entry
109382807 CDS
T04661
Symbol
PABPC1
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
hai
Hipposideros armiger (great roundleaf bat)
Pathway
hai03015
mRNA surveillance pathway
hai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109382807 (PABPC1)
09123 Folding, sorting and degradation
03018 RNA degradation
109382807 (PABPC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hai03019
]
109382807 (PABPC1)
03041 Spliceosome [BR:
hai03041
]
109382807 (PABPC1)
Messenger RNA biogenesis [BR:
hai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
109382807 (PABPC1)
mRNA cycle factors
Stress granule specific factors
109382807 (PABPC1)
Spliceosome [BR:
hai03041
]
Complex C
Other components
Complex C specific factors
109382807 (PABPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_7
RRM_10
RRM_5
RBD_RDR6
RRM_occluded
RRM_3
YflT
Motif
Other DBs
NCBI-GeneID:
109382807
NCBI-ProteinID:
XP_019498102
UniProt:
A0A8B7RBJ9
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MNPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFER
HEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKN
LDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEINGRIVAT
KPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINPYQPAPPSGYFMAAIPQTQNRA
AYYPPSQIAQLRPSPRWTAQGARPHPFQNMPGAIRPAAPRPPFSTMRPASSQVPRVMSTQ
RVANTSTQTMGPRPATAAAAATPAVRTVPQYKYAAGVRNPQQHLNAQPQVTMQQPAVHVQ
GQEPLTASMLASAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESP
ESLRSKVDEAVAVLQAHQAKEAAQKAVNSATGVPTV
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccagcgcccccagctaccccatggcctcgctctacgtgggggatctacacccc
gacgtgaccgaggcgatgctctacgagaagttcagcccggccgggcccattctgtccatc
cgggtctgcagggacatgatcacccgccgttccttgggctacgcatatgtgaacttccag
cagccggcggacgcggagcgtgctttggacaccatgaattttgatgttataaagggcaag
ccagtacgcatcatgtggtctcagcgtgatccatcacttcgcaaaagtggagtgggcaac
atattcattaaaaatttggacaaatccattgataataaagcactgtatgatacattttct
gcttttggtaacatcctttcgtgtaaggtggtttgtgatgaaaatggttccaagggttat
ggatttgtacattttgagacacaggaagcagctgaaagagctattgaaaaaatgaatggg
atgcttctaaatgatcgcaaagtatttgttggacgatttaagtctcgtaaagaacgagaa
gcggaactcggagctagggcaaaagaattcaccaacgtttacatcaagaattttggagaa
gacatggatgatgaacgccttaaggatctctttggcaagtttggacctgccttaagtgtg
aaagtaatgacggatgaaagtggaaaatccaaaggttttggatttgtaagcttcgaaagg
catgaagatgcacagaaagctgtggatgagatgaatggaaaggagctcaatggaaaacaa
atttacgttggtcgagctcagaaaaaagtggaacggcagacggaacttaagcgcaaattt
gaacagatgaagcaagacaggatcaccagataccagggtgttaacctttacgtgaaaaat
ctcgatgatggtattgatgatgaacgtctccggaaagagttttctccatttggtacaatc
actagtgcaaaggttatgatggagggtggtcgcagcaaagggtttggttttgtatgtttc
tcctccccagaagaagccactaaagcagttacagaaataaatggtagaattgtggccacc
aagccattgtacgtagctttagctcagcgcaaagaagagcgccaggcacacctcactaac
cagtatatgcagagaatggcgagtgtgagagctgtgcccaaccctgtaatcaacccctac
cagccagcacctccttcaggttacttcatggcagctatcccacagactcagaaccgtgct
gcatactatcctcctagccaaattgctcaactaagaccaagtcctcgctggactgctcag
ggtgccagacctcatccattccaaaatatgcccggtgctattcgcccagccgctcctaga
ccgccatttagtactatgagaccagcttcttcacaggttccacgagtcatgtcaacacag
cgtgttgctaacacatcaacacagacaatgggtccacgtcctgcaactgctgctgctgca
gcaactcctgctgtccgcaccgttccacagtataaatatgctgcgggagttcgcaatcct
caacaacatcttaatgcacagccacaggttaccatgcagcagcctgctgttcatgtacaa
ggtcaggagcctttgactgcttccatgttggcatctgcccctcctcaagagcaaaagcaa
atgttgggtgaacggctatttcctctaattcaagccatgcacccttctcttgctggtaaa
atcactggcatgttgttggagatcgataattcagaacttcttcatatgcttgagtctcca
gagtctctccgttctaaagttgatgaagctgtagctgtgctacaagcccaccaagctaaa
gaggctgcccagaaagcagtaaacagtgccaccggtgtcccaactgtttaa
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