Hipposideros armiger (great roundleaf bat): 109386596
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Entry
109386596 CDS
T04661
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
hai
Hipposideros armiger (great roundleaf bat)
Pathway
hai03440
Homologous recombination
hai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
109386596 (PALB2)
03460 Fanconi anemia pathway
109386596 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hai03400
]
109386596 (PALB2)
DNA repair and recombination proteins [BR:
hai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
109386596 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
109386596 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
109386596
NCBI-ProteinID:
XP_019505474
UniProt:
A0A8B7RX35
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKNAVQKTGKEQDCLVQ
QDASPRLNHSEHKTKVSSCDTLPINTHLHEETGDAEPESFIPGRGPVEGSDTQRADDIHD
RFASRLSGPDGEKRESKLPGRRKKQQKRTFISPERDSFSDTNSFLLSGKSLQEPEDITRE
NPRMPATEVRAYFSSPKSASPDSPVTETKGQSVLTPPAARPQSGINPPGKGRHFHSATPL
LHAPSDSSSNQHLQRKPPRRIWEPIAHGVKNISPTPPGNSRAHDKRSTVFTGSPEVNQAT
GACGQLPSSPNFEAHSACSVNELTYDNVAVNETENLKEPSQADKGSESSSYALEKESLQE
NEVRSHPKSQEKQAVISPVSGENQTRSCTEQEGPLFPAEYYVRITRHMSKCQREVAMEPV
IPSHLGARKKGLKRKNKDAANNVNLSGEEANQTEIQVSDTHAGPPSSRSPFQKLLSFLEV
TSPSEPPKNDFFSKKAVTQPSGRRHREKRRAVLTALSRHHEPASGTSGVPSVEEGVAKHR
DQSEKARIHDFQLPDEDFGALKLEKLKSCSKKPREPFGSKGYGGRHLKDWSCVFQKELSP
QPTGRDAEDLEEELTVLPGKAHPRMPVLKSQPQGKGLSSSMLLFTPSGTLAPDDNDRPPA
DACSPALPLVGTTPARGSQPHWDRASAELVARARSPPRLSPFKATVSLASDCKPCDSHAS
PPELDGSLHVSGQKGLPSSDCDSGSQAIPLLTESFTFKENQLCADTCLESWRRPTEQTGV
TDVPACDGLNPGDLRLVSKLQNPSGSCSVDVSALWWEIAGLKEPCVVTACEYAVSLWRPL
DTRQWEEVHSWHFTEVPVLQIVSVPDVRNLVCVALGDLEIREIRALLCSSDGGGEKQVLL
SSGNIQAVLGLTKRRLVLSSGTLCDQQIEITMFAEDGRSKEKQLLMPPEEPVLNFAEVQG
MQEALLGTTARNNIVIWNLKTGQLLKKMPIGDSCQASVCHKAYSEMGLLFVVLSHPCAKE
SEPSGSPVFQLLAMNPKTTLSAGVMLYCLPHGQAGRFLEGDVKGNFAAAVLTSGTIAIWD
LLLGHCAVLLPPISDQNWSFVKWSGTDSHLLAGQKDGNIFVYLVS
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaagcccctcagctgtgaggagaaggaaaagttgaaggaaaaa
ttggcattcttgaaaagggaatacagcaagacactagcccgcctccagcgtgcccaaaga
gctgagaaggttaagaatgctgttcagaaaacggggaaagaacaagattgcttggttcag
caggacgcttcaccacggctaaaccactcagagcataaaactaaagtttcttcttgtgac
acattacccatcaacacccatctccatgaagaaactggagatgctgagcctgagtctttt
atccctggacgtggcccagtggaagggtcagacacacaaagagccgatgacatccacgac
cgttttgcctcccggctcagtggccctgatggagagaaaagggagagtaagttgccagga
agaagaaagaagcagcagaagagaacttttatttcaccagagagagactctttctctgat
accaattcattcctgctctctgggaaaagcctacaggaaccagaagacatcactagagaa
aatcctaggatgcccgccactgaagtaagagcctacttttcaagtcctaagtctgctagt
ccagactcaccagtcacagaaactaagggacagagtgtattaactccaccagctgctaga
ccacaaagcggtatcaatccgccgggaaaaggaaggcatttccacagtgcgaccccactt
ctgcacgccccatcagatagcagcagcaaccagcaccttcagcgcaagcctcctagaagg
atctgggaacctattgctcacggtgtaaaaaacattagccctactccacctggaaactca
agggcacacgacaaaaggagtactgtctttacaggtagcccagaggtaaatcaggctaca
ggtgcatgtggccagctgcctagcagtcctaacttcgaggcacatagtgcatgttctgta
aatgaactcacttatgataacgtagctgtcaacgaaactgaaaacttaaaagaaccaagc
caagcagacaagggttcagaatcctccagttatgctcttgaaaaggaaagtcttcaggaa
aatgaggtgcggagtcaccccaagagccaagagaaacaggcagtaatctcgcctgtttct
ggagaaaatcaaacacgttcttgcacagagcaggaagggcctctttttcctgcggaatat
tatgtgagaataacacgacacatgtcaaaatgtcagagggaagtggccatggagcctgtc
attccaagtcatctgggtgccaggaagaaagggttgaaacgtaagaataaggacgctgct
aacaacgtgaacctttctggtgaagaagctaaccaaactgaaattcaggtatctgacaca
cacgcagggccgccaagttcaagaagcccatttcagaaacttctctcattccttgaagtc
acctcgccctctgagccccctaaaaacgactttttttctaagaaggcggtcacgcagccg
tcaggtagaagacacagagaaaagagaagggcggtgctcactgctctgtcacgtcaccat
gagcctgcttccggcacatcaggtgttcccagcgtggaggaaggtgtggccaaacacaga
gatcagagtgaaaaggcgagaatacatgatttccagttacctgatgaagattttggagca
cttaagcttgaaaaactgaagtcctgctccaaaaagccgagggagccttttggatccaaa
gggtatggagggaggcatcttaaggattggagctgtgtttttcagaaggaactgagccct
caaccaactggccgagatgcggaggacttggaagaggagctgacggttctgccaggaaaa
gcacaccccagaatgccagtgctgaagagccagcctcaggggaagggcctttcctcatcc
atgctccttttcaccccttccggcaccctggcgcctgacgataacgacaggccgccagca
gatgcgtgctcgcccgccctgcccctcgtgggcacgactccagctcggggctcccagcct
cactgggacagagcgtctgcagagcttgtcgcacgagcgcgctctccaccccggctctct
cccttcaaggccacagtcagtcttgctagtgattgtaagccatgcgacagtcacgccagc
ccaccagagttagatggcagcctgcacgtgtcaggacagaaaggactgccttcctctgac
tgcgattctggttcccaagccatccctctgctcactgagtcattcactttcaaagaaaat
cagctctgtgcagacacgtgcctggaatcgtggcgacgccccaccgaacagactggggta
acagatgttcctgcgtgtgacggcttaaacccaggcgacctgcggttggtttcaaagtta
cagaacccttcagggtcttgctccgtggatgtgagtgccctgtggtgggaaatcgcgggg
ctgaaggagccgtgcgttgtaactgcttgtgagtatgcagtttccctttggagaccgctg
gacactcgccagtgggaagaagtgcattcctggcacttcactgaggttcctgtgttacaa
atagtttccgtgcctgacgttcgtaaccttgtgtgtgtggctttgggagatttggagatc
cgagaaatcagggcgttgctttgttcctctgacggtggaggtgaaaagcaggtgctcctc
agttctggaaacatccaagccgtgcttggcctgacaaagaggaggctagtccttagcagt
gggacgctttgtgatcaacaaatagaaatcacgatgtttgcagaagatggaagaagcaaa
gaaaaacagttgttgatgccccctgaagagccagtgctaaattttgctgaggttcaaggg
atgcaggaagctctgcttggcaccactgcgaggaacaacatcgttatctggaatttaaaa
accggtcagctcctgaagaagatgcccattggtgattcctgccaagcttccgtctgtcac
aaggcctactccgaaatggggctcctgtttgttgttctgagtcacccttgtgccaaagag
agcgagccgtcaggaagccccgtgtttcagctgcttgcgatgaaccctaagacgaccctg
agcgcgggcgtgatgctctactgtcttcctcacgggcaggctggaaggttcctggaaggg
gacgtgaaaggtaattttgcagccgccgtactgacttctggaacgattgccatttgggac
ttgcttctaggtcactgcgctgttctcctcccccccatctcggaccaaaactggtccttt
gttaaatggtcgggaactgattctcatttgctggctggacaaaaagatgggaatatattt
gtatatttagtaagttag
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