Hipposideros armiger (great roundleaf bat): 109390478
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Entry
109390478 CDS
T04661
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
hai
Hipposideros armiger (great roundleaf bat)
Pathway
hai03013
Nucleocytoplasmic transport
hai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109390478 (UPF2)
03015 mRNA surveillance pathway
109390478 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hai03019
]
109390478 (UPF2)
Messenger RNA biogenesis [BR:
hai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109390478 (UPF2)
mRNA cycle factors
P-body specific factors
109390478 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
109390478
NCBI-ProteinID:
XP_019512506
UniProt:
A0A8B7SGQ2
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MPAERKKPASMEEKESLLNNKEKDCGERRPVNSREKPKEEIKLTAKKEVIKVPEDKKKKL
EEEKRKKEDKERKKKEEEKVKVEEELKKKEEEEKKKHDEEERKKQEEQAKRQQEEEAAQL
KEKEESLQLHQEAWERHQLRKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNGLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QVWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSVIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKSAAEKFNLTFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNTERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADLLD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKSCQNKESNKDDSKEAKDLKDNKEVTNPDDLELELENLEINDDTLELEGTDEAE
DLTKKLLDEQELSALLERAVGQTVVIQTWAAMDFCMNMNTKANRKKLVRALFIVPRQRLD
LLPFYARLVATLHPCMSDVAEDLCSMLRGDFRFHVRKKDQINIETKNKTVRFIGELTKFK
MFTKNDTLHCLKMLLSDFSHHHIEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQA
MHLDARYVTMVENAYYYCNPPPAEKTVKKKRPPLQEYVRKLLYKDLSKVTTEKVLRQMRK
LPWQDQEVKDYVICCMINIWNVKYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGM
EVNQPKFNQRRISSAKFLGELYNYRMVESAVIFRTLYSFTSFGVNSDGSPSSLDPPEHLF
RIRLVCTILDTCGQYFDRGSSKRKLDCFLVYFQRYVWWKKSLEVWTKDHPFPIDIDYMIS
DTLELLRPKIKLCNSLEESIRQVQDLEREFLIKLGLVNDKDSKDSMTEGETLEEDDEEEE
GGVETEEQSGNESEVNEPEEEEGSDNDEDEGEEEEEENTDYLTDSNKENETDEENTEVMI
KGGGLKHVPCVEDEDFIQALDKMMLENLQQRSGESVKVHQLDVAIPLHLKSQLRKGPPLG
GGEGEAESADTMPFVMLTRKGNKQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTL
DINERQEQEDYQEMLQSLAQRPAPANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgtaaaaagccagcaagtatggaagaaaaagaatctttgctaaacaac
aaggaaaaagactgcggtgaaagacggccagtgaacagcagggaaaaaccaaaagaagag
atcaagctcactgccaagaaggaggttattaaggtccctgaagataaaaagaagaaactg
gaagaagaaaagagaaaaaaagaagacaaagaacgtaagaaaaaagaagaagaaaaggtg
aaggtagaggaggaattgaagaaaaaagaggaagaagaaaaaaagaaacatgacgaagaa
gagagaaagaagcaggaagagcaggctaaacgacagcaagaggaagaagctgctcagctg
aaagagaaggaggaatcccttcagcttcatcaggaagcttgggaacgacatcagttaagg
aaggaacttcgtagcaaaaaccaaaatgctccagacaatcgaccagaggaaaatttcttt
agccgactagactcaagtttgaagaaaaataccgcttttgtcaagaaactaaaaactatt
acagaacaacagagagactccttgtcccatgattttaatggcctaaatttaagcaaatac
attgcagaagctgtagcttctattgtggaagcaaagctaaaaatatctgatgtgaattgt
gctgtgcacttatgctctctctttcaccagcgctatgccgactttgccccgtcacttctt
caggtttggaaaaaacattttgaagcaaggaaagaagagaaaacacctaacattaccaaa
ttaagaactgatttgcgtttcattgcagaattgaccatagttgggattttcactgacaag
gaaggtctgtctgtaatctacgaacagctaaaaaatattattaatgctgatcgagaatcc
catactcatgtttctgtggtgataagtttttgtcgacattgtggagatgatattgctgga
cttgtaccaaggaaagtaaagagtgctgcggagaagtttaatttgacttttcctcctagt
gagataattagtccagagaaacaacaacctttccagaatcttttaaaagaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacagaatactgagagacaaaac
aggcgtattctacattctaaaggggagctaagtgaagatagacataaacagtatgaggaa
tttgctatgtcttatcagaagctgctggcaaattctcagtccttagcagaccttttggat
gaaaatatgccagatcttcctcaggacaaaccaacaccagaagagcatgggcctggaatt
gatatatttacgcctggtaaacctggagaatatgacttggaaggtggtatatgggaagat
gaagatgctcggaatttttatgaaaacctcattgatttgaaggcttttgttccagccatc
ttgtttaaagataatgaaaaaagttgccagaataaagagtccaacaaagatgattccaaa
gaggcaaaagaccttaaggataataaagaggtaacaaatcctgatgatttggaacttgag
ttggagaacctagaaattaatgatgacaccttggagctagagggtacggatgaagctgaa
gatcttacaaagaaacttcttgatgagcaagaattatcagctttacttgaaagagctgtt
ggacaaactgtggttattcaaacttgggcagcaatggatttttgcatgaacatgaacaca
aaagcaaataggaagaagctggtccgggcactcttcatagttcccagacaaaggttggat
ttgctacccttttatgcaagattggttgctacattgcatccctgcatgtctgatgtagca
gaggacctttgttccatgctgaggggggatttcagattccatgtacgaaaaaaggaccag
atcaatattgaaacaaagaacaaaaccgttcgttttattggagaactaactaagtttaag
atgttcacaaaaaatgatactttacattgtttaaagatgcttctgtcagacttttcccat
caccatattgaaatggcatgtaccctcctggaaacatgtggaagatttcttttcagatct
ccagaatctcacttgaggaccagtgtacttttggaacaaatgatgagaaagaaacaagca
atgcatctcgatgcaagatacgtcacaatggtggagaatgcatattactattgcaaccca
cctccagctgaaaaaacagtgaaaaagaaacgtcctcctctccaggaatatgtccggaaa
cttttgtacaaggatctctccaaggttaccactgagaaggttttgagacagatgcgaaag
ttaccctggcaggaccaagaagtgaaagactatgtaatttgttgtatgataaacatctgg
aatgtgaaatataatagtattcattgtgtagccaacctcttagcaggactagtgctctac
caagaagatgttggaatccatgttgtggatggagttttagaagatattcgattaggaatg
gaggttaatcaacctaaatttaatcagagacgtatcagcagtgccaagttcttaggggaa
ctttataattaccgaatggtggaatcggctgttatttttagaactctttattcttttact
tcatttggtgttaactctgatggctctccaagttcactggaccctcctgagcaccttttc
agaattcgactagtgtgcactattttggatacctgtggccagtactttgacagaggttcc
agtaaacgaaaactcgattgcttccttgtgtattttcagcgttatgtttggtggaagaaa
agtttggaggtttggacaaaagaccatccatttcctattgacatagattacatgatcagt
gatacactagaactgctaagaccaaagatcaaactctgtaattctctggaagaatccatc
aggcaggtacaagacttggaacgagaattcttaataaaactaggcctagtaaatgacaaa
gattcaaaagattctatgacagaaggagaaactcttgaagaggatgatgaagaagaagaa
ggaggagtagaaacagaagaacagtctggaaatgaaagtgaagtaaatgaaccagaagaa
gaggagggttctgataatgatgaggatgaaggagaggaagaagaggaagagaatacagat
tatcttacagattcaaataaggaaaatgaaactgatgaagaaaatacagaggtaatgatc
aaaggaggtggacttaagcatgtaccttgtgtagaagatgaggacttcattcaagcactg
gataaaatgatgctagaaaatcttcagcagcgaagtggcgaatcagttaaagtacaccaa
cttgatgttgctattcccttgcacctcaaaagccagctgagaaaggggcccccactcggt
ggtggggagggagaggccgagtccgcagacacaatgccgttcgtcatgttaacaagaaaa
ggcaataaacagcagtttaagatccttaatgtgcccatgtcttcccaacttgctgcaaac
cactggaaccagcagcaggcagaacaagaagagaggatgagaatgaaaaagctcacacta
gatatcaatgaacggcaagaacaagaagattatcaagaaatgctgcagtctcttgcccag
cgcccagctccagcaaacaccaaccgggagcggcggccacgataccagcacccaaaggga
gcacctaatgcggatctaatctttaagactggtgggaggagacgttga
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