Hipposideros armiger (great roundleaf bat): 109393228
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Entry
109393228 CDS
T04661
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hai
Hipposideros armiger (great roundleaf bat)
Pathway
hai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109393228 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hai03041
]
109393228 (PRPF40B)
Spliceosome [BR:
hai03041
]
Complex A
U1 snRNP components
U1 related factors
109393228 (PRPF40B)
Complex B
109393228 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
109393228
NCBI-ProteinID:
XP_019517782
UniProt:
A0A8B7SWJ8
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MSVPDSGPRPPAAPAPFPPGPPMMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGI
MPPMLPPMGAPPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAATGPPRALW
SEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKE
SRWTRPKDLDDLEALVKQEAVGKPQQQQPQTLQPQPPQPQPDPPPAPPGPTPVPMGLLEP
EPGGSEDCDVSDAAQPLEQGFLQQPEEGPSSSAGQHQPLQQEEEESKPEPERSGLSWSNR
EKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEK
EEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLF
FLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMD
KEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTW
MELYPAVSTDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVN
TAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRLRRREAAFRSM
LRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVLETECQHLHTKGRK
HGRKGKKHHRKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGA
ALGGRSSPSSRLLLGSDHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKDPE
QDKDRELRLVELPNRSPGFGVKKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcccgattctggtccccggcccccagcagcgcctgccccctttccaccgggg
ccccccatgatgccaccacccttcatgccccctccaggaattccaccaccctttcctccg
atgggtctacctcccatgagtcagagaccaccggccatcccccccatgccacctggcatc
atgcccccaatgcttccaccaatgggggcaccaccaccactcacacagataccaggaatg
gtacctcccatgatgccaggaatgctgatgccagcggtgcctgtcaccgcagcgacggct
ccgggtgcggacaccgccagctctgctgtggctgcgacaggccctccgagggccctatgg
agtgagcatgtggcccctgatgggcgcatctactactacaatgctgacgacaagcagtcc
gtgtgggagaagcccagcgtgctcaagtccaaggcggagttgcttctgtcccagtgtccc
tggaaagagtataagtcagacacaggcaaaccatactactataacaaccagagtaaggag
tcccgctggacccggcccaaggacctggatgacctggaggctctagtcaaacaagaggct
gtagggaaaccgcagcagcagcagccacagacactacagccgcagcctcctcagccacag
cctgaccccccacctgcgcctcctggccccaccccagtgcccatgggcctcctagaaccc
gagccaggtgggagtgaagattgtgatgtgtcagatgctgcccagcccctggagcagggg
ttcctgcagcagccagaggagggccccagcagttctgctggacagcatcagccactacag
caggaggaagaggaatcaaagccagaaccggagaggtctggcctcagttggagcaaccgt
gagaaggcaaagcaggcctttaaggagctgctgagggacaaggctgtcccctccaacgcc
tcatgggaacaggccatgaagatggtggtcaccgacccccgttacagtgccttgcccaaa
ctgagtgagaaaaagcaggcattcaatgcctacaaggcgcagcgggagaaggaggagaaa
gaagaggcccggctgagggccaaggaggcaaagcagaccttgcagcacttcctggagcag
cacgaacgcatgacctccaccacccgctaccggcgggcagaacagacctttggggagctg
gaggtctgggctgtggtccccgagagggatcgaaaagaggtttatgatgatgtcctcttc
ttcctggccaagaaggagaaggaacaggccaagcagctccggcgccgcaacatccaggcc
ctgaagagtatcctggatgggatgagtagcgtcaacttccaaaccacatggtcccaggcc
cagcagtacctcatggataaccccagctttgctcaggaccatcagcttcagaacatggac
aaggaagatgcactgatctgcttcgaagagcacatccgagctttggagagggaggaagag
gaggagcgggagcgggcccggcttcgggagcggcgccagcaacgcaagaaccgggaggcc
ttccagaccttcctggatgagctgcacgagacagggcagctgcactctatgtccacctgg
atggagctgtacccagcggtcagcactgatgtccgctttgccaacatgctgggccagccg
ggctccacccctctggacttgttcaagttctatgtggaggagttgaaggcacgattccat
gatgagaagaagatcattaaggacatccttaaggaccggggcttctgtgtggaggtgaac
acagcctttgaggacttcgcccacgtcataagctttgacaagagggctgctgcgctggac
gcaggcaacatcaagctgaccttcaatagtctgctggagaaagcagaggcgcgggagaga
gagcgggagaaggaggaggcacgaaggcttcggcgcagggaggccgcctttcgaagcatg
ctgaggcaggccgtgcctgctctggagctgggcactgcctgggaagaggtccgtgagcgc
tttgtgtgtgactcagcctttgagcagatcaccctggagtcggagcggatccggctcttc
cgggagttcctgcaggtactggagactgaatgccagcacctccacaccaaaggccggaag
cacggcaggaagggcaagaagcaccatcgcaagcgctcccactcaccctcaggctccgag
tcagaagaggaggagctgcccccgccctctctccgaccccccaaacggaggcggcggaac
ccttctgagtctggctccgagccctcttcctcacttgattcagttgaaagtgggggtgct
gcccttggaggacggagctccccatcctcccgccttctccttggatcagatcatggcctt
cggaaagccaagaaaccaaaaaagaaaactaagaagagaagacacaagtcgaacagtcct
gagagtgagacagaccctgaggagaaagctggcaaggagagtgatgagaaagacccagag
caggacaaggacagggagctccggctggtagagctccctaaccgctccccaggttttgga
gtcaagaaagagaagacgggctgggacacgtcagaaagtgagctgagtgagggcgagctg
gagaggcggcggcggacactcctgcagcagctggatgaccaccagtga
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