Hipposideros armiger (great roundleaf bat): 109393471
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Entry
109393471 CDS
T04661
Symbol
SCN11A
Name
(RefSeq) LOW QUALITY PROTEIN: sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
hai
Hipposideros armiger (great roundleaf bat)
Brite
KEGG Orthology (KO) [BR:
hai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hai04040
]
109393471 (SCN11A)
Ion channels [BR:
hai04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
109393471 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
109393471
NCBI-ProteinID:
XP_019518270
UniProt:
A0A8B7T177
LinkDB
All DBs
Position
Unknown
AA seq
1723 aa
AA seq
DB search
MDDWCYPVIFPDARNFRPFTADSLAAIEKRIAIEKEKKLKDPTAAEPQPRPQLDLKASRK
LPKLYGDIPRELIAKPLEDLDPFYRNHKTFMVLNKKRTIHRFSAKRALFILGPFNSFRSL
AIRISVHSLFSMFIICTVIINCVFMASTYGNQRINIDTDNAEYVFTGIYIFEALIKILAR
GFILDEFSFLRDPWNWLDSIVIATAFVSYSPSAKGSGISLSSLRTFRVFRALKAISVVSG
LKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGSLSHICVQESCLNYTKYDDCC
LEKKSSTEFRLCGTWLGKSACPNMSQCRSTHRNPDYGYTNFDSFGWSFLAMFRLMTQDSW
EKLYRQTLRTSGPFAVFFFVVVIFLGSFYLVNLTLAVVTMAYEEQNRNVAAETEAKEKMF
QEAQQLLKEEKEALVAMGIDRSSLNSLEASSFSPKKRKLFGSKRKSFFVRESGKEQVPVP
DSDEDTPIKPRLLEQTKRLSQNLSVDLCEEHRDPFQRQRALSAVSILTITMQEQEKSQEP
CLPCGENLASKYLVWNCSPQWLCFKKALRMVMTDPFTELAITICIIINTVFLALEHHKMD
RSFEKMLYTGNLVFTGVFMAEVCLKIIALDPYYYFRRGWNIFDTIVALLSIIDVMMSEVS
VTVFRSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVIFIFSVVGMQLFGS
KYNATRNNTSSCDPASSCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQEDKTSLCIV
VFLLIMVIGKLVVLNLFIALLLNSFSNEERDGKGGGEARKTKVQLALDRFHRAFCFVICT
VGHFCRKGCSRQNLPKQKEVTGGSSVESKDVIPLVAEMKKGPETWEELGVSTSAPKTLDV
GLDGTWLAPLAEEEDIESPEEDIVQPEAGKQAHELHQGAKSARPRVQSVEIDVFPEDDAY
LSVQNPRKKSDATSVCSECSTIDLQDPFRRVPEMVPQKEPERCLPKGLSCCSPCCAVNKR
KALWITWWNLRKTCYQIVKHSWFESFIIFVILLSSGALIFEDINLEKQPNIQALLQCTDN
IFTYIFILEMVLKWVALGFRKYFTSAWCWLDFIIVIVSLLSLYNFLEFKALKTHSPHIRP
ILGRSRAWXVSHIHYVFLLFSFLKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNLLS
GKFGRCVNETDVSYFINASVIANRSQCKMGNLSWVNLPVNFDNVGMAYLALLQVHLESGQ
DIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKCQGLVFDLVTHQIFDVVIIVLILLNMV
SMMAESHDQSETMKTILDHLNVAFVVIFTIECLIKIFALRQYYFTNGWNLFDCVIVVLSI
VSTMVSTLEEQEHIPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIG
LLLFLVMFIYAIFGMNSFCKVEQDSGIDDIFNFQTFAGSLLCLFQITTSAGWDTLLKPML
QSKSSCSSNSENCHLSTIAIAYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGED
DFEIFYEVWEKFDPEATQFIKYSSLSDFADALPEPLRVAKPNKFQFLVMDLPMVTGDRLH
CLDILFAFTTRVLGNSDGLDNMKAMMEEKFTEANPFKKLYEPIVTTTKRKEEERCAAVIQ
KAFRKYMKMTMSALDDKPPTPLQILCNGDLSISGVAEGKVHYD
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggatgactggtgctacccagtgatcttcccagatgcacggaatttccgccccttcact
gctgactctctcgccgcaattgagaagcgaattgccatagaaaaggagaaaaagctcaaa
gatccgacagctgcagagccccaacctcgacctcaacttgacctaaaggcctccaggaag
ttgcccaagctgtatggtgacattccccgtgagctgatagcgaagcccctggaagacttg
gacccattctacagaaatcataagacatttatggtgttgaacaaaaagagaacaatccac
cgcttcagtgccaagcgtgccctgttcattttggggcctttcaattcattccgaagttta
gccattaggatctcggtccattcattgtttagcatgttcatcatttgcactgtcatcatc
aactgtgtgttcatggcctcaacttatgggaatcagcgcattaatatagacaccgacaat
gctgagtatgtcttcactgggatttatatttttgaagctttgataaaaatattggcaaga
ggttttattctggatgagttttcttttcttcgagatccatggaactggctggactccatt
gtcattgcaacagcgtttgtctcgtattcaccaagtgccaaaggcagcggcatcagtctg
tcatccctgcgtacatttcgagtgttcagagctttgaaagccatttcagtagtttcaggt
ctgaaggtcattgtgggggccttgctgcgctctgtgaagaagcttgtcgatgtgatgatc
ctgactctcttctgcctcagcatcttcgccctggtaggtcagcagctcttcatgggaagt
ctaagccacatatgtgtccaggagagctgtttgaattacactaaatatgacgactgttgt
ttagaaaagaaaagttccactgaattcagactctgtggcacctggttgggtaaaagtgcc
tgtccgaacatgtctcaatgcagatccacccacaggaatcctgactatggctatacaaat
tttgacagttttggctggtcttttcttgccatgttccggcttatgacccaagattcctgg
gagaagctttatcgacagaccttgcgtacctcggggcccttcgcagtcttcttctttgtg
gtggtcatcttcctgggctccttctacctcgttaacttaaccctggctgtggtcaccatg
gcttatgaggagcagaacaggaacgtagctgctgaaacggaggccaaggagaagatgttt
caggaagcccagcagctgttaaaggaggagaaggaggctctggttgccatgggaattgac
agaagttcactgaattcccttgaagcatcgtctttttccccaaagaagagaaagctattt
ggtagtaaaaggaagtccttttttgtcagagagtctgggaaagaacaggttccagtacca
gattctgatgaagataccccaataaaaccacgtctcctggagcaaaccaaacggctgtcc
cagaacctgtcggttgacctctgtgaagaacacagagaccctttccaaaggcagagggca
ctgagtgctgtcagtatcctcaccatcactatgcaggaacaagaaaaatcgcaggagcct
tgcctcccatgtggggaaaacctggcctccaaatacctcgtgtggaactgtagcccccag
tggctgtgctttaagaaggccctgagaatggtgatgacggacccctttactgagctggcc
atcaccatctgcatcataatcaatactgtcttcttggccttggagcatcacaaaatggat
aggagttttgagaaaatgttgtatactggaaatctggttttcacgggtgtttttatggca
gaagtgtgcctaaaaatcattgcgctcgacccctactactactttcgccgcggctggaac
atttttgataccattgttgctcttctcagtattatagatgtgatgatgagcgaagtcagt
gtgacagttttccgttccttaagagtgctgagggtcttcaagttagccaaatcttggcca
actttgaacacactgattaagataattggccactccgtgggagccctcggaaacctgacc
gtggtcctggccattgtgatctttattttctcagtagttggcatgcagctgtttggctct
aaatacaatgccacaagaaataatacaagttcctgtgaccctgccagctcatgtttgcga
cgctggcacatgggggatttctaccactcctttctggtggtattccgcatcctctgtggg
gaatggatcgaaaacatgtgggaatgtatgcaagaagataaaacttcactgtgcattgtt
gtctttctgttgatcatggtgataggaaaacttgtggtactcaacctattcattgccttg
ctgctcaattccttcagcaatgaggagagagatggaaaagggggaggagaggccaggaaa
accaaagtccagttagcactggaccggttccatcgtgctttttgttttgtgatatgcact
gttgggcacttttgtcgcaaggggtgcagtaggcagaacttaccaaagcaaaaagaagtg
acaggaggctcttctgtggagagcaaagatgtcattcccctggtcgcagagatgaaaaaa
ggcccagagacctgggaggagctgggtgtatcaacttccgcaccaaagaccttggatgtt
gggctggatgggacgtggttggccccacttgcagaggaagaagatattgaatctcctgag
gaagatattgtgcaacctgaggctggaaaacaggcccatgagctccatcagggggccaag
tctgccagaccaagagttcaaagtgtggaaattgacgtgttccctgaagatgatgcttat
ctgtcagtacagaatccccgaaagaagtccgatgctaccagtgtgtgctcagaatgtagc
accatcgatctacaagatccctttaggcgggttcctgaaatggttccccaaaaggaacca
gagagatgtttgcccaaaggcctgagttgctgctccccatgctgtgctgtgaacaagaga
aaggccctctggatcacttggtggaacctgcggaaaacctgctaccaaatagtgaaacac
agctggtttgagagctttattatctttgtgattctgctgagcagtggggcactgatattc
gaagatattaaccttgaaaaacaacccaatatccaagcattacttcaatgtactgacaat
attttcacatacatttttatcctggagatggttctgaaatgggtggccttaggattcagg
aagtatttcaccagtgcctggtgctggctcgatttcatcattgtgattgtgagtttacta
tctctgtataacttcttagaatttaaggcattaaagacacattccccgcacatcaggcct
atcctgggaagatcaagagcttggtgagtctcacacatccattatgttttccttctattt
tctttccttaaggtggtcgttaatgctctcataggtgccatacctgccattctgaatgtt
ttgctcgtctgcctcattttctggctcatattttgtatcctgggagtaaacttgctttct
ggaaaatttggaagatgcgtgaatgaaacagacgtctcgtacttcataaatgcgagtgtt
attgcaaatcgaagtcaatgtaaaatgggaaatttgtcgtgggtcaacctgccagtcaac
tttgacaatgtgggaatggcttacctcgccctgctgcaggtgcacttggagagtggccaa
gacatttttatgacagaagaacagaagaaatactataatgcaatgaaaaaattaggatcc
aaaaaacctcagaagcccattccaaggcctctgaacaaatgccaaggtctcgtgtttgac
ctggtcacacaccagatcttcgacgtcgtcatcattgtccttattttactcaacatggtt
agcatgatggctgagtcgcatgatcagtctgaaaccatgaagaccatcctggaccatctc
aacgtggccttcgtggtcatctttacaattgagtgtctcatcaaaatctttgctttgagg
caatactacttcaccaatggctggaatttatttgattgtgtgatcgtggtcctatctatt
gttagtacaatggtctctaccttggaagaacaggaacacattccttttcctccgacactc
ttcagaattgtccgcttggctcggattggcagaatcctgaggcttgtccgggcagcacga
ggaatcaggacactcctttttgctctgatgatgtcccttccctctctattcaacattggt
ctcctactctttctggttatgtttatttatgccatttttggtatgaactctttttgcaaa
gtggagcaagactctggaattgatgacatattcaacttccaaacttttgcaggcagcttg
ctctgtctctttcagataaccacgtcagcaggctgggataccctcctcaaacccatgttg
caatcaaaaagttcctgtagctccaactcagagaattgtcacctctctaccatcgccata
gcctactttgtcagttacatcatcatctcctttctcattgttgtcaatatgtatattgct
gtgattttagagaactttaatacagccaccgaagaaagtgaggaccctttgggtgaagat
gactttgaaatattctatgaagtctgggaaaagtttgacccagaagcaacacagtttatc
aaatattcctccctttctgattttgcggatgcccttcctgagcctttgcgtgtggcaaag
ccaaataaatttcagtttctagtaatggacttgcccatggtgactggagatcgcctccac
tgcctggatattctttttgctttcaccactagggtgctcggtaactccgatggtttggat
aacatgaaagccatgatggaggagaagttcacggaagccaaccctttcaagaagttatat
gaacccatagtcaccaccaccaagaggaaggaagaggagagatgcgctgctgttattcaa
aaggcctttcgaaagtacatgaagatgaccatgagtgccttggatgacaaacctcctacg
cccctgcagatactctgcaatggagacttgtccatctctggggtggcggagggcaaggtc
cactatgactga
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integrated database retrieval system
