Helicobacter ailurogastricus: ASB7_00870
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Entry
ASB7_00870 CDS
T08780
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hail
Helicobacter ailurogastricus
Pathway
hail03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hail00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASB7_00870 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hail03021
]
ASB7_00870 (rpoA)
03400 DNA repair and recombination proteins [BR:
hail03400
]
ASB7_00870 (rpoA)
Enzymes [BR:
hail01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASB7_00870 (rpoA)
Transcription machinery [BR:
hail03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASB7_00870 (rpoA)
DNA repair and recombination proteins [BR:
hail03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASB7_00870 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Stu2_CTS
Motif
Other DBs
NCBI-ProteinID:
BDQ28250
LinkDB
All DBs
Position
70779..71708
Genome browser
AA seq
309 aa
AA seq
DB search
MSVSAFESGYAITLAHPIRRFLLQSSVGYAPIGIKIENVAHEFDSVRGMAEDAALFIANL
KNIRLVGRAKNPDEQLVVHYSFKGPAKLCGKHLENEGVGVVDKEAYLATINEDVQLDFAL
IIQRGMGYVPSESIRGLIPSDYIPLDAYFTPIKKVVYNIENMLVDGNPNFERVVFDIESD
GQIDPQHAFQEAVKTMHAQMHIFSTSMAHSKAYALEDSLEIKDLVRKVEDLDLSARCFNC
LDKIGIKYIGELVLMDAYELKGIKNLGKKSYDEIAEKLEQLKYPVGQELSPEFKASLKAR
IEKLKSEES
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtgtccgcctttgaaagcggctacgccatcactttagcacaccccatccgccgc
tttcttctgcaaagctctgtggggtatgcgcccatcggcattaaaattgaaaatgtcgcc
cacgagtttgactccgtgcggggcatggctgaggatgccgcccttttcatcgccaacctt
aaaaacatccgcctagtcgggcgggctaaaaacccagacgaacaacttgtggtgcattac
tctttcaagggcccagcgaagttgtgcgggaaacacttagaaaacgaaggcgtgggcgtg
gtggataaagaagcctatttagccacgatcaacgaggatgtgcaactagactttgccctc
atcatccaaaggggcatgggctatgtgcctagtgagagcattagagggctgattcctagc
gattacatccctttagatgcctacttcacgcccattaaaaaggtggtctataacattgaa
aacatgctcgtggatggcaacccgaattttgaaagggtggtgtttgacattgagagcgat
gggcagatcgatccccagcacgctttccaagaggcagtaaagaccatgcacgcacagatg
catattttcagcaccagcatggcgcactccaaagcctacgccctagaagacagcctagag
atcaaagaccttgtgcgtaaagtcgaggacttagacctaagcgcgcgttgctttaattgt
ctagataaaatcgggatcaagtacatcggggaattggtgctcatggacgcttacgagctt
aaaggcattaaaaacttaggcaaaaagtcctacgatgagatcgccgaaaaattagaacaa
ctcaaataccccgtgggccaagagctctcccctgagttcaaggcctctttaaaagcacgg
attgaaaaattaaaaagcgaggaaagttaa
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