Helicobacter ailurogastricus: ASB7_05510
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Entry
ASB7_05510 CDS
T08780
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
hail
Helicobacter ailurogastricus
Pathway
hail03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hail00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASB7_05510 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hail03019
]
ASB7_05510 (rny)
Messenger RNA biogenesis [BR:
hail03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ASB7_05510 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
RNase_Y_N
HDOD
KH_1
KhpA-B_KH
TMPIT
DUF3836
Motif
Other DBs
NCBI-ProteinID:
BDQ28714
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All DBs
Position
508386..509864
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AA seq
492 aa
AA seq
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MEEALSILIPCLLTGIGVFYFTKRSCHASSQTLIAQAKAKADMLIYQAQVLYKTKEEESK
TLALQLQQDHQERQKTQDAAYQYKLDELKSHEKQQQQHWHHKHRQLEQSKAELESLKQEL
EHGKRAQDKLCQEYQELKDQALQTLMERSGYTKEEAQTLLLRLLEEELILQKAALVRRYE
KQAKKEAKERAHFILAEATSRFASSFAMENLTSVVALPNAEFIGRIIGKEGKNIDTFKRI
SGVELMIDEETKTITLSCFNLYRRQIATQTLELLIQDGRIQPSRIETVYQRVEANMEENI
LKEAEEVILDLQLDSMDEELKRLLGRMKYRTSYGQNALTHSIEVAILAGMIAEQLGGDAK
LARRAGILHDIGKALTQEHGGDHVELGAEVCVRYHEHPVVINAIYAHHDRQEIKSIECAA
VCAADALSAARPGARRKENENFLARMHDLERIASQQSGVEKVFAMDAGRGARDRLPRSSE
RCQSPPTGARHR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagctttaagcattttgatcccttgcctgcttacaggcataggcgttttttac
ttcactaaaaggagttgccacgcctccagccaaaccctcatcgcccaagccaaagctaaa
gcggacatgctcatctaccaagcccaagtgctttacaaaaccaaagaagaagaatccaaa
accctagccttgcaattgcaacaagaccaccaagaacgccaaaaaacccaagatgctgcc
taccaatacaaactagacgaactcaaaagccatgaaaagcaacaacaacagcactggcat
cacaaacataggcaattagagcaaagcaaagccgagctagagagtcttaagcaagaatta
gagcatggcaaacgcgcccaagacaagctgtgccaagagtaccaagagctcaaagatcaa
gcgttgcaaaccctaatggagcgctcgggctacaccaaagaggaagcccaaaccttgctt
ttgcgcttgctggaggaagagttgattttacaaaaagccgctttggtgcgccgctatgaa
aaacaagccaaaaaggaagccaaagagcgggcgcattttatcttggcagaggcgacttca
agatttgccagctcttttgcgatggagaatttaaccagcgtggtcgctttgcccaatgcc
gagttcatcgggcgcatcatcggcaaagagggcaagaacatcgacacctttaagcgcatc
agcggggtggagctgatgatcgatgaggaaacaaagaccatcactttgagttgctttaat
ctctaccggcggcaaatcgccacgcaaaccttagagcttttgatccaagatgggcgcatc
caaccctcgcgcattgaaaccgtgtaccagcgggtggaggcaaacatggaggaaaacatc
ttaaaagaggcagaagaagtcattttagacttgcaattagattccatggacgaagagttg
aaaaggctcttggggcgcatgaagtaccgcactagctatgggcaaaacgcactcacccac
tccatcgaagtggcgatcttagccggcatgattgccgagcaactgggcggagacgcaaaa
ttagctagaagggcggggattttgcacgacatcggcaaagctttgacccaagagcacggg
ggagatcatgtagaattgggggctgaggtgtgtgtgcgctaccacgagcaccccgtggtg
atcaacgccatttacgcccaccacgaccgccaagagatcaagagcatagagtgcgctgcc
gtgtgcgctgccgatgccctgtctgctgcaaggcccggggcacgccgcaaggaaaacgaa
aatttcttggcccgcatgcacgatctagagcgcatcgccagccagcaaagtggcgtggaa
aaggtctttgcgatggatgcagggcgaggtgcgcgtgatcgtctgccccgatcaagtgag
cgatgccaaagtccccctactggcgcgcgacatcgctaa
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