Helicobacter ailurogastricus: ASB7_06930
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Entry
ASB7_06930 CDS
T08780
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
hail
Helicobacter ailurogastricus
Pathway
hail02024
Quorum sensing
hail03060
Protein export
hail03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hail00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ASB7_06930 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ASB7_06930 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ASB7_06930 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
hail02044
]
ASB7_06930 (ffh)
Enzymes [BR:
hail01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ASB7_06930 (ffh)
Secretion system [BR:
hail02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ASB7_06930 (ffh)
Eukaryotic Sec-SRP protein
ASB7_06930 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
AAA_31
Zeta_toxin
ArsA_ATPase
AAA_30
KTI12
Fer4_NifH
AAA_14
ResIII
NPHP3_N
YqeC
T2SSE
nSTAND3
AAA_16
AAA
ATP_bind_1
AAA_33
CLP1_P
TXNDC16_3rd
SLFN-g3_helicase
Thymidylate_kin
6PF2K
APS_kinase
ATPase
AAA_24
AAA_18
Glyco_transf_4
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BDQ28856
LinkDB
All DBs
Position
641166..642503
Genome browser
AA seq
445 aa
AA seq
DB search
MFDTLTQSFKNALGKIRFQDDLKALEKALDELKKALLRNDVHHKVARELVKNIEAKTKAK
GIGKQQFLDALQESLLEILSVPGAASGFVYAPTPPTIVLMCGLQGGGKTTTCAKLANYLK
TRNKKVLLVACDLERLAAIEQLQVLGAQIGVEVFHKAGSVLDIAKGALERAKEGQFDVVL
VDSAGRLAIDKPLMDELKALKDLLKPLETFYVADALSGQDGVRSAQTFHTEIGISGVVLS
KFDSDSKGGVALGIAHQLQIPLRFIGHGEKIPDLDIFVPERIANRLMGAGDIVSLVEKTS
SVIDPKEAKNISKKLKKGQFGFTDFLEQLEKVKKLGSISSLVSMIPGLSGVAGALKGTDL
ENSAEIKRIKAMVNSMTAKERDNPSLLNGSRKKRIALGSGLEVAEINRILKRFDQASQLA
KKLSSKGGVANLLQMLQQNQPPQRH
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaccctaacccaatcttttaaaaacgctttaggcaaaatccgttttcaagac
gatttaaaagcccttgaaaaagccctagatgagctgaaaaaggcgttattgcgtaatgat
gtccaccataaagtcgccagagaattagttaaaaacatcgaggcaaagaccaaggctaag
gggatcggcaaacagcaattcttagacgctttgcaagagagtttattagagattttaagc
gtgccgggggcggctagtggttttgtctatgcccccaccccgcccacgattgtgttgatg
tgtggcttgcaaggggggggcaagaccaccacctgtgccaagctggcaaattatttaaaa
acccgcaataaaaaggtgttgttggtggcgtgcgatttggagaggttagccgcgatcgag
caattacaagtcttgggggcgcaaatcggggtagaagtctttcacaaagcggggagcgtg
ctagacattgccaagggggcattagagcgtgccaaagaggggcagtttgatgtggtgctt
gtggatagtgcagggcgtttggcgatcgacaagcccttaatggacgagcttaaagcccta
aaagacttgctaaagcccttagaaactttttatgtggcagacgcactaagcggacaagac
ggggtgcgctcggcgcagaccttccacaccgagataggcattagcggcgtggtgttaagc
aagtttgacagcgacagcaaggggggcgtggcgttaggcatcgcccaccagctacaaatc
cccttgcgcttcatcgggcatggcgagaaaatccccgatttagatattttcgtgcctgag
cgaatcgctaatcgcctcatgggggcgggcgacattgtaagcttggtggagaaaaccagc
agcgtgatcgaccccaaagaggcaaaaaacatttctaaaaagctcaaaaagggacaattt
ggcttcaccgactttttggagcagttagaaaaagtgaaaaaactaggctcgatcagctct
ttggtgtcgatgatccccgggcttagtggcgtggcgggagctcttaaaggcacagattta
gaaaactcagccgagatcaaaaggatcaaggcgatggttaattccatgactgccaaagag
cgcgacaacccctctttgctcaatggcagccgtaaaaagcgcatcgctttgggctcgggg
ttagaagtggcagagatcaatcggattttaaaacgattcgatcaggccagccagctagcc
aaaaaattaagctccaaaggaggcgtggcaaacttgctccaaatgttgcaacaaaaccaa
cccccccaaaggcattaa
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