Helicobacter ailurogastricus: ASB7_09820
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Entry
ASB7_09820 CDS
T08780
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hail
Helicobacter ailurogastricus
Brite
KEGG Orthology (KO) [BR:
hail00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hail03016
]
ASB7_09820 (truD)
Enzymes [BR:
hail01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ASB7_09820 (truD)
Transfer RNA biogenesis [BR:
hail03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ASB7_09820 (truD)
Prokaryotic type
ASB7_09820 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BDQ29145
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All DBs
Position
917191..918321
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AA seq
376 aa
AA seq
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MLQIMVYNAPMQNEDLLPRFFSASHAPIEFYFKKCSRDFVVQEEPLYAFSQSGEHLIAHV
RKKDKTTWEMLSLLSQVLGCKMSAFGYAGLKDKNALTFQYISMPKAHEKALSQHAPTLYE
QGVKILDTTAHTHKIRLGHLKGNHFNMRLKKLTPLNAQKIAEVLEILQEKGFLNYFGAQR
FGRKGDNFKQAHTGKKKLDKFLLSSQQSFCFNQWLSGRARLNAFVNNFSPLEIVREYPQI
SLEQAKALKAQPQDFKLLEGDVLCHYPFGKYFYHTAQDLDTNLDRFRVKSLVPTGLLPGL
KVLEAKDLAREFEEPFKQEIDSYGDRRFALVYPGEVDFLYLSQEAQGQLKFFLPKGAYAT
IFLEEIAHQELFSKDV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgctccaaattatggtgtataatgcccctatgcaaaatgaagacctgctcccccgtttt
ttcagcgcaagccatgcgcccattgagttttactttaaaaagtgctcccgtgattttgtg
gtacaagaagaaccgctttatgcctttagccaaagcggtgagcatttaatcgcccatgtc
cgcaaaaaagacaagaccacatgggagatgttaagcctgctctctcaggtgctgggctgt
aaaatgtctgcctttggttacgcggggcttaaggataaaaacgccctcacctttcaatat
atctccatgcctaaagcccatgagaaagccctatcccagcacgccccaaccctctacgag
cagggcgtaaaaatcctagacaccactgcccacacgcataaaatccgcctagggcattta
aagggcaaccactttaatatgcgcctaaagaaactcactccattaaacgcccaaaaaatc
gccgaggtcttggagattttgcaagaaaaagggtttttgaattatttcggggcccagcgt
tttgggcgtaaaggggataattttaaacaagcccacacgggcaagaaaaagttagacaaa
tttttactttccagccagcaaagtttttgtttcaatcagtggttaagtggtagggcgcgt
ttaaacgcctttgtcaacaactttagcccccttgagattgtgagagaatatcctcaaatc
agcctagagcaagccaaagccctcaaagcccagccccaagattttaaactcttagaaggc
gatgtgctttgccattacccctttggcaagtatttttaccacaccgcccaagatttagac
accaatttagataggtttagggtaaaaagccttgtgcctacggggttattgccaggcctt
aaagtcctagaggccaaagatttggctagggagtttgaagagccttttaagcaagagatc
gactcttatggggatcggcgttttgcgctggtctatcctggtgaagtggattttttgtat
ttgtcccaagaagcacaggggcaactcaagtttttcctacccaagggggcttacgccacg
atctttttagaagagattgcccaccaagagttgtttagcaaagatgtttaa
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