Helicobacter ailurogastricus: ASB7_11780
Help
Entry
ASB7_11780 CDS
T08780
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hail
Helicobacter ailurogastricus
Pathway
hail03410
Base excision repair
hail03430
Mismatch repair
hail03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hail00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ASB7_11780
03430 Mismatch repair
ASB7_11780
03440 Homologous recombination
ASB7_11780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hail03400
]
ASB7_11780
DNA repair and recombination proteins [BR:
hail03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ASB7_11780
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ASB7_11780
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ASB7_11780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
BDQ29341
LinkDB
All DBs
Position
1086342..1087655
Genome browser
AA seq
437 aa
AA seq
DB search
MLEAFRAHIEAISKEDGTHKFSLDSVLEMGEGQKALELLHNALKAQKQIILGGDYDCDGM
SGTALALYFFKEVLNYPNINYIIPRRNTDSYGMSVALLEAYATKKRFVKTSYNAREEVIG
GQALDFNNSLFITIDNGATIPDEVCAFLHAHNTPLILSDHHEFLEGRIPACDAFVHPLLS
SKHPFKGISGACVGYLFLLAYAKHYGVKMRLDHLQYLQILAGLSTIADMMDLSTPYNRQL
VQRMDCTLKTAMPDSLKALYLAQKYQNPYKLSTLAWDIIPLINAVGRLDGIEGFCHCNLV
VDLLATREANPTYAALLVQTNQKRKECIQEIKKTLQPTKKGPLIYAGGHIPRGVLGMLAN
QFLEMGGVVALCWRYENESIEASLRAKEADLMQILAHLKDKGIGVQGGGHKQACGLVFAN
ENEFQQALEFLGQAHAF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgttagaggcgtttagagcacacatcgaagccatcagcaaggaggatggcacgcataaa
ttcagcctagatagcgtgctagaaatgggcgaggggcaaaaggcattagaattgctgcac
aacgccctaaaagcgcaaaagcaaatcattcttgggggggattacgattgtgatggcatg
agcggcacggctttagccctgtacttctttaaagaggtgctaaattatcctaacatcaat
tacatcatccctagacgcaacaccgacagctatggcatgagtgtcgcgctcttagaggct
tacgccacaaaaaagcgttttgtaaagaccagctacaacgctagggaggaggttattggc
gggcaagccctagattttaacaatagccttttcatcaccattgacaatggggcaaccatc
cccgatgaagtgtgtgcctttttacacgcccacaacacgcccctaattctaagcgatcac
cacgaatttttagaggggcgcatccccgcttgcgatgcctttgtgcatcccctcttaagc
tccaagcacccctttaagggcattagcggggcgtgcgtagggtatttatttttgctcgcc
tacgccaagcactacggggtaaaaatgcgcctagatcacttgcagtatttgcagatcttg
gccggacttagcaccatagccgacatgatggacttaagcacgccttataaccggcaactc
gtgcagcgcatggattgcaccctaaaaactgctatgccagactcgcttaaagccttgtat
ttagcccaaaaataccaaaacccctataaactaagcaccctagcatgggacatcattccg
ctcatcaacgccgtgggacggctcgatggcattgagggcttttgccattgcaatttggtt
gtggatttgctcgccacaagagaggctaaccccacttacgccgcgcttttagtgcagacc
aatcaaaaacgcaaagagtgtattcaagagatcaaaaagaccctgcaacccacaaaaaaa
ggcccgctcatctatgcgggcgggcacatccctagaggggttttaggcatgctggccaat
caattcttagaaatggggggggttgtggccctgtgttggcgctatgaaaacgagagcata
gaagcgtccttgagggcaaaagaagcggatttaatgcaaattttagcccaccttaaagac
aagggcattggcgtgcaaggcggggggcataagcaggcgtgcgggctcgtctttgcaaat
gaaaatgaatttcaacaagctttagagtttttagggcaagcgcatgctttttaa
DBGET
integrated database retrieval system
