Helicobacter ailurogastricus: ASB7_15960
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Entry
ASB7_15960 CDS
T08780
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
hail
Helicobacter ailurogastricus
Pathway
hail03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hail00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ASB7_15960 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hail03400
]
ASB7_15960 (uvrB)
DNA repair and recombination proteins [BR:
hail03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ASB7_15960 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ASB7_15960 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
SWI2_SNF2
AAA_30
Kinesin
DUF87
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
BDQ29759
LinkDB
All DBs
Position
1488747..1490705
Genome browser
AA seq
652 aa
AA seq
DB search
MDFILQAPYQPSLEQEKAVSQLLQGVKQGAAYQTLLGVTGSGKTFSMAYLISKLQMPTLV
MSHNKTLCAQLYSEFKSFFPKNHVEYFISYFDYYQPESYIPRRDLFIEKDSAINEDLERL
RLSAITSLLGYDDVVVVASVSANYGFGDPLEYLSMLEKIEVGQSVAYTEFLRKLIDMGYE
RCDLLERGKFRVVGESVDIFPAYNDTNFIRVEFFGDEIERIYSFDALENKPLKALESYIL
YAANAFIVSQSRLKSALDSIEAELAERLKFFKEHNKPLEYERLKTRTEFDLEMMAATGIC
KGIENYSRHFTDKQAGDTPYTLLDYFAQKKRPFLVIVDESHVSLPQFKGMYAGDSSRKQV
LVDYGFRLPSALDNRPLKYEEFIKKSPHFLFVSATPNPLELELSGGHIAEQIIRPTGLLD
PEYEVRPTQNQVQDLYNTIKQVVARKERVLVTTLTKKMAEELCKHYLEGGLKVQYLHSDI
DAIERNHLIRAFRLGEFDILIGINLLREGLDLPEVSLVAILDADKEGFLRSATALIQTMG
RVARHIHGKVIFYADKITASMQEAMTTTDGRRAKQIAFNKAHNITPKSTQRPLEEELKDY
TPSKPKFTDKMPKKEKEQLIKKLRAQMQERARVLDFEAAAKLRDEIARIRGL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggactttatcctacaagccccctaccaaccgagtttagagcaagaaaaagcggtgtca
cagcttttacaaggcgtgaagcaaggggcggcttaccaaaccttgctgggggttacgggc
agcggcaagacctttagcatggcctatctcatctctaaattgcaaatgcccaccttagtc
atgtcgcacaataaaaccctttgcgcccagctttacagcgaatttaaaagcttttttccc
aaaaaccatgtggagtattttatctcttactttgactactaccagcccgagtcgtatatc
ccaaggcgggatttattcattgaaaaagacagcgcgatcaacgaggatttagagcgtttg
cgtttaagtgcgatcacttcgctgctaggctatgacgatgtggtggtggtggcgagcgtg
tcggcaaattatggttttggcgacccgctggaatatttgagcatgctagaaaaaatcgag
gtggggcaaagcgtggcttatacagagtttttaagaaaactcatagacatgggttatgaa
cgttgcgacttattagagcggggcaagtttagggtggtgggggagagcgtggatattttc
cccgcctacaacgacaccaactttatccgtgtggaattttttggcgatgagatcgagcgc
atttatagttttgacgcgctggagaacaaaccgcttaaagccctagaaagttacattctc
tacgccgcaaacgccttcattgtgagccaaagccgccttaaaagcgctctagatagcatt
gaagccgagttagccgagcggcttaaattctttaaggaacacaacaagcccctagaatat
gagaggttaaaaacgcgcacagaatttgatttagaaatgatggcggctacgggcatatgc
aagggcattgaaaactactcgcggcattttaccgacaagcaagccggcgacaccccctac
accttgctagactacttcgcccaaaagaaacgcccctttttagtcattgtggatgagtcg
catgtgagcttgccccaatttaagggcatgtatgccggcgattctagccgcaagcaggtt
ttggtggattatggctttagactgccctccgcgcttgacaaccgccccttaaaatacgag
gaatttataaagaagtctccccattttctctttgtctcagccacaccaaatcccctagag
ctagagctctcaggcgggcacatcgccgagcaaatcatccgccccacagggctattagac
cccgagtatgaagtccgccccacacaaaatcaggtgcaagatttatacaacacgatcaag
caagtcgtggcacgtaaagagcgggtgttggtaacaactttgacaaaaaaaatggctgaa
gagctgtgtaagcactatttagagggcgggcttaaggtgcaatacctacacagcgacata
gacgcgatcgagcgcaaccacttgattcgcgcctttaggctgggcgagtttgacattttg
atcggcattaacttattaagagaggggctagacttgcccgaagtgtcgctagtcgccatt
ttagacgcggataaagaggggtttttaagaagcgcaacggcgttgattcaaaccatgggg
cgggtggcgcgccacatccacgggaaagtgattttctacgccgataaaatcacggcgagc
atgcaagaggcgatgacaaccaccgatggcaggcgcgctaaacaaatcgccttcaacaaa
gcccacaacatcacgcccaaaagcacccaacgcccccttgaagaggagcttaaagactac
accccctcaaagcccaaatttacagacaaaatgcctaaaaaagaaaaagagcagttgatt
aagaagttgcgcgcccaaatgcaagagagggcacgggtgttagactttgaggcggcggcc
aaattgcgcgatgaaatcgcacggatcagagggctttag
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