Haloplanus rubicundus CBA1113: DU500_00035
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Entry
DU500_00035 CDS
T05613
Name
(GenBank) mechanosensitive ion channel family protein
KO
K03442
small conductance mechanosensitive channel
Organism
haj
Haloplanus rubicundus CBA1113
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haj02000
]
DU500_00035
Transporters [BR:
haj02000
]
Other transporters
Pores ion channels [TC:
1
]
DU500_00035
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AXG04940
UniProt:
A0A345DYB8
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All DBs
Position
4694..5623
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AA seq
309 aa
AA seq
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MLQVALQTATPTPVPTPVVGPEGLAAYWALVRRAVWFVAGFVAVVLVGWFAVEPLVARFV
RRRNSNNPTIQEAVSRYVRLLVLVVAFFVAAGTAGYGRFIGDSALVIAAGTLAVGVAGQT
VIGSIVSGLVLVVDPEFNVGNYIEWADREGTVQSITLRVTRILTPDGELVTVPNTLLTGQ
AITRPYGRGRRRIVEHVGVAYEADVAAALDHLTAATEAVDDIVAEPTPKAYVDDFGSDSV
VLRVHYWIEDPRRRDIFAVRSAYARAAKERLEAAGITISPASKRELQGRIGVDGAADGTA
GGETDGRAD
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgctccaggtcgcactccagacggccacgccgacgccggtgccgacgccggtcgtcggc
ccggagggcctcgccgcctactgggccctcgtccgtcgggcggtgtggttcgtcgccggc
ttcgtcgccgtcgtcctcgtcgggtggttcgcggtcgaaccgctggtcgcacggttcgtc
cgccgacgcaacagcaacaacccgacgatccaggaggcggtctcgcggtacgtccgcctg
ctcgtcctcgtcgtcgccttcttcgtcgccgcgggcaccgcgggctacggtcggttcatc
ggcgattcggcgctcgtcatcgcggccgggaccctcgccgtcggcgtcgccgggcagacc
gtcatcggctccatcgtcagcggcctcgtcctcgtcgtcgaccccgagttcaacgtcggc
aactacatcgagtgggcggaccgcgaggggaccgtccagtccatcacgctccgggtgacg
cggatcctgaccccggacggcgaactcgtcacggtaccgaacacgctcctgacgggacag
gcgatcacccgaccgtacggtcgggggcgacgacgcatcgtcgaacacgtcggcgtcgcc
tacgaggcggacgtggcggcggcgctcgatcacctgacggcggcgacggaagccgtcgac
gacatcgtagccgagccgacgccgaaggcgtacgtcgacgacttcggctccgattcggtg
gtgctccgcgtccactactggatcgaggacccccgtcggcgggacatcttcgccgtccgg
tcggcgtacgcccgggcggccaaggagcgactggaggcggctgggatcacgatcagcccg
gcgtcgaagcgggagcttcagggccggatcggcgtcgacggcgccgccgacggcaccgcc
ggcggtgagaccgacggccgcgccgactag
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