Haloplanus rubicundus CBA1113: DU500_00515
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Entry
DU500_00515 CDS
T05613
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU500_00515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haj03000
]
DU500_00515
03021 Transcription machinery [BR:
haj03021
]
DU500_00515
Transcription factors [BR:
haj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
DU500_00515
Transcription machinery [BR:
haj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DU500_00515
RNA polymerase III system
TFIIIB
DU500_00515
RNA polymerase I system
SL1/TIF-1B
DU500_00515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
AXG05028
UniProt:
A0A345EH27
LinkDB
All DBs
Position
100892..101452
Genome browser
AA seq
186 aa
AA seq
DB search
MSDPADSIEIQNVVASTGIGQELDLEALAEDLPGADFNPDNFPGLVYRTQEPKAAALIFR
SGKIVCTGAKSIDDVHEALGIIFQKLRDLQIPVEEDPEITVQNIVSSADLGHTLNLNALA
IGLGLEDVEYEPEQFPGLVYRMDDPDVVILLFGSGKIVITGGKRTADAAEAVEVIVDRID
DLGLLG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacccggcagactcgatagagattcagaacgtggtggcgtcgaccggcatcgga
caggaactcgacctcgaagcgctggcggaggacctcccgggagcggacttcaaccccgac
aacttcccggggctggtctaccggacgcaggaaccgaaagcggccgccctcatcttccgc
tcggggaagatcgtttgcacgggcgcgaagagcatcgacgacgtgcacgaggcgctcggc
atcatcttccagaaactccgggacctccagatacccgtcgaggaggacccggagatcacg
gtccagaacatcgtctccagcgcggacctgggacacaccctcaacctgaacgccctcgcc
atcggcctcggattggaggacgtggagtacgagcccgagcagttcccgggcctcgtctac
cggatggacgatccggacgtggtgatcctcctcttcgggagcgggaagatcgtcatcacg
ggtgggaagcggaccgccgacgcggccgaggcggtcgaagttatcgtcgaccgcatcgac
gacctcggactgctggggtaa
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integrated database retrieval system
