Haloplanus rubicundus CBA1113: DU500_01235
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Entry
DU500_01235 CDS
T05613
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DU500_01235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haj03021
]
DU500_01235
Enzymes [BR:
haj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DU500_01235
Transcription machinery [BR:
haj03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DU500_01235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
HTH_3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AXG08005
UniProt:
A0A345EIA0
LinkDB
All DBs
Position
complement(243405..246338)
Genome browser
AA seq
977 aa
AA seq
DB search
MQTPKEIGGIQFGLMDPETYRDMSATKVITADTYDDDGYPIDMGLMDPRLGVIDPGLECR
TCGQHSGSCNGHFGHIELAAPVIHVGFTKLIRRLLRSTCRECGRLALTEEEREEYEGNLA
RAEELGKDPNDVLKAAVRQARKQSYCPFPDCDGVMHDIKHEKPTTYYEVQDVLAGDYSER
IAEAMQPDPDDEDDEGTSPRELAEGLGIDLERVNDIMAGEFRPKSDTRKQLEKALGVDLT
EEDMNKLMPSDIRDWFEDIPDEDIEVLGIDPSRSRPEWMILTVLPVPPVTARPSITLDNG
QRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIEDLWELLQYHVTTFIDNEISGTPPAR
HRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSARTVISPDPTLSLNEVGVPERVATEMT
QTLNVTERNVDNARQYVANGPEGHPGANYVRRPDGRRLKVTEKNCEELATKVEEGWEVNR
HLVDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFRLNTTVCPPYNADFDGDEMNMHALQN
EEARAEARVLMRVQEQILSPRFGENIIGAIQDHISGTYLLTHENPHFSETQALDLLRATS
VDELPPADGEEDGEPYWTGRTVFSELLPDDLNLEFTSSAGDTVRIEDGQLVEGTIDEDAV
GAFGGEIVDTLTKVYSETRARVFINEVAALAMRAIMHFGFSLGIDDESIPEEANEMVDEA
IGNAYERIEDLIDSYEAGDLESLPGRTIDETLEMKIMQTLGKARDSAGEIAEDHFDEDNP
AVIMARSGARGSMLNLTQMAGCVGQQAVRGERINRGYEDRTLSHYEPNDLSAEAHGFVEN
SYRGGLTPREFFFHAMGGREGLVDTAVRTSKSGYLQRRLINALSELESQYDGTVRDTSDT
IVQFEFGEDGTSPVKVSSTDDNPIDVEGIADRVIEAEFDSDQEKERFLGEREPPTNLSEY
AGPGLNKAQGMEVESDD
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaccaaaggagatcggcggcattcagttcgggctgatggacccggagacgtat
cgcgacatgtccgcgacgaaggtcatcacggcggacacctacgacgacgacggctacccc
atcgacatggggttgatggacccgcgtctgggcgtcatcgaccccggactggagtgtcgg
acctgcggccagcactcggggtcgtgtaacgggcacttcggccacatcgaactcgcggcg
cccgtcatccacgtcggcttcacgaagctcatccggcggctcctgcgctcgacgtgtcgg
gagtgcggtcggctggcgctcaccgaggaggaacgcgaggagtacgaggggaacctcgcc
cgggccgaggagctcggcaaggaccccaacgacgtgctgaaggcggcggtccggcaggcg
cgcaagcagagctactgcccgttcccggactgcgacggcgtgatgcacgacatcaaacac
gagaagccgaccacctactacgaggtgcaggacgtgctcgccggggactattcggagcgc
atcgccgaggcgatgcagcccgacccggacgacgaggacgacgaggggacgagtccccga
gaactcgcggagggtctcggtatcgatctggagcgcgtcaacgacatcatggccggcgag
ttccggccgaaaagcgacacgcggaagcagttggagaaggccctcggtgtggacctgacc
gaggaggacatgaacaagctgatgccctccgacatccgggactggttcgaggacatcccg
gacgaggacatcgaggtgctgggcatcgatcccagccggtcgcggccggagtggatgatc
ctcaccgtcctgccggtgccgccggtgacggcccgtccctccatcacgctggacaacggc
cagcgctccgaggacgacctgacccacaagctggtggacatcatccgcatcaaccagcgg
ttcatggagaaccgcgaggcgggcgcgccccagctcatcatcgaggacctctgggaactg
ctccagtaccacgtcaccacgttcatcgacaacgagatttcggggacgccgccggcgcgc
caccgctcgggtcgaccgctgaagacgctctcccagcgcctcaagggcaaggagggccgc
ttccgtggctcgctgtccgggaagcgcgtcaacttctcggcccggacggtcatcagtccg
gacccgaccctgtcgctcaacgaggtcggggtgcccgaacgggtcgccacggagatgacc
cagacgctgaacgtgaccgagcgcaacgtcgacaacgcgcgacagtacgtcgccaacggg
ccggaggggcatccgggcgcgaactacgtgcgccggcccgacggccgccgactgaaggtc
accgagaagaactgtgaggaactcgccaccaaggtggaggaagggtgggaggtcaaccgc
cacctcgtcgacggcgacatcgtgatcttcaaccgccagccgtcgctccaccggatgtcg
atcatggcccacgaggtggtcgtgatgccgtacaagacgttccggctgaacaccactgtc
tgcccgccgtacaacgccgacttcgacggcgacgagatgaacatgcacgccctccagaac
gaggaggcgcgggcggaggctcgggtgctgatgcgggttcaggagcagatcctctcccct
cgcttcggcgagaacatcatcggcgcgattcaggaccacatcagcgggacctacctgctg
acccacgagaacccccacttctcggagacgcaggcgctcgacctgctccgcgcgacgagc
gtggacgaactcccgccggcggacggggaggaggacggcgagccctactggacgggccgc
accgtcttctccgaactcctgcccgacgacctgaacctcgagttcacgtcgtcggccggt
gacaccgtccgcatcgaggacggccagttggtcgagggcaccatcgacgaggacgcggtc
ggcgcgttcggcggcgaaatcgtcgacaccctgaccaaggtgtactccgagacgcgcgcc
cgcgtgttcatcaacgaggtggccgcgctggcgatgcgggcgatcatgcacttcgggttc
tcgctcggcatcgacgacgagtcgatcccggaggaggcgaacgagatggtcgacgaggcc
atcgggaacgcctacgagcggatcgaggacctgatcgactcctacgaggcgggtgacctc
gagtccctccccggtcggactatcgacgagacgctggagatgaagatcatgcagacgctc
ggcaaggcccgcgacagcgcgggcgagatcgccgaggaccacttcgacgaggacaacccg
gcggtcatcatggcccggtcgggcgcccgtgggtcgatgctcaacctcacccagatggcc
ggctgtgtgggccagcaggcagtccgcggcgagcggatcaaccgcggctacgaggaccgc
accctcagccactacgagccgaacgacctctccgcggaggcccacggcttcgtcgagaac
tcctaccgtggcggcctgacgccgcgggagttcttcttccacgccatgggtggccgcgag
gggctggtcgacacggcagtccggacctcgaagtccggctacctgcagcgccgcctcatc
aacgccctgtccgaactcgagtcgcagtacgacggcaccgtccgcgacacctccgacacc
atcgtccagttcgagttcggcgaggacggcaccagtccggtgaaggtgtcttccaccgac
gacaaccccatcgacgtcgaagggatcgcggatcgggtcatcgaggcggagttcgactcc
gaccaggagaaagagcggttcctcggcgagcgcgagccgccgacgaacctctccgaatat
gcgggccccggtctgaacaaggcccagggcatggaggtggagtccgatgactga
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