Haloplanus rubicundus CBA1113: DU500_01725
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Entry
DU500_01725 CDS
T05613
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU500_01725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haj03000
]
DU500_01725
03021 Transcription machinery [BR:
haj03021
]
DU500_01725
Transcription factors [BR:
haj03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
DU500_01725
Transcription machinery [BR:
haj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
DU500_01725
RNA polymerase III system
TFIIIB
DU500_01725
RNA polymerase I system
SL1/TIF-1B
DU500_01725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
AXG05247
UniProt:
A0A345DZ75
LinkDB
All DBs
Position
complement(343018..343578)
Genome browser
AA seq
186 aa
AA seq
DB search
MTDPKETINIENVVASTGIGQELDLQSVAMDLEGADYDPEQFPGLVYRTQNPKSAALIFR
SGKIVCTGAKSTADVHESLHIVFDKLRDLKISVDEEPEIVVQNIVTSADLGKNLNLNAIA
IGLGLENIEYEPEQFPGLVYRLDDPDVVALLFGSGKLVITGGKQPEDAEEAVDVIVSRLE
ELGLLG
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcccaaggagacgatcaacatcgaaaacgtggtggcttctaccggaatcgga
caggaactcgacctccagagcgtggcgatggacctcgaaggtgcggactacgaccccgaa
cagtttccggggctcgtctaccggacgcagaaccccaagtcggcggccctgatcttccgc
tcgggcaagatcgtctgcaccggcgcgaagtcgacggccgacgtacacgagagcctgcac
atcgtcttcgacaaactccgcgacctcaagatcagcgtcgacgaggagccggagatcgtc
gtccagaacatcgtcacgagcgccgatctgggcaagaacctcaacctgaacgccatcgcc
atcggcctcggcctcgaaaacatcgagtacgaacccgagcagttcccgggtctcgtctac
cgcctcgacgaccccgacgtggtcgcgctcctcttcggctccggcaaactcgtcatcacg
ggcgggaaacagcccgaagacgccgaggaagccgtcgacgtgatcgtctcccgactcgaa
gagctcggcctcttgggatag
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