Haloplanus rubicundus CBA1113: DU500_02275
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Entry
DU500_02275 CDS
T05613
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DU500_02275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haj03400
]
DU500_02275
Enzymes [BR:
haj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DU500_02275
DNA repair and recombination proteins [BR:
haj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DU500_02275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AXG05348
UniProt:
A0A345E932
LinkDB
All DBs
Position
complement(447208..447900)
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AA seq
230 aa
AA seq
DB search
MAPDPSPVPPEPDDALVLDPDCRRCPALAEARDRIAWGNGPRDAAVMVVGEAPAAGDPDD
PEWPGGNRSGLAYTSRHSGRRIRSLLASVGVVGRRPTARGTSFRAVDDAFYTNAVKCFPS
DGDGSNREPTPTERSNCRNHLRAEIETIDPAVVLPTGKHATTSLLAAEDRTLDGFLESVL
DPIDCPSLGVTAIPLLHPSYADVWRARLGYDRESYREALAAALRSCGVTP
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgacccgtcgcccgtcccgcccgaacccgacgacgccctcgttctcgacccg
gactgccggcgctgtcccgccctcgccgaggcgcgcgaccgcatcgcgtggggcaacggt
ccgcgggacgccgccgtgatggtcgtgggcgaggcgcccgccgccggcgaccccgacgac
cccgagtggcccggcggcaaccgctcggggctggcctacacgtcccgacactccggccgc
cgcatccgatcactcctcgcgagcgtcggcgtcgtcggccgccggccgactgctcgcgga
acgtcgttccgcgccgtcgacgacgcgttctacacgaacgccgtgaaatgcttcccatcc
gacggcgacggctcgaaccgcgaaccgacgccgacggagcggtcgaactgccggaatcac
ctccgcgccgaaatcgagactatcgaccccgccgtcgtgctcccgaccggcaagcacgcg
acgacgagcctcctcgccgccgaggatcggacgctcgacggctttctggagtcagttctc
gatccgatcgactgcccgtcgctcggcgtcaccgcgatacccctcctgcacccctcctac
gccgacgtgtggcgcgcgcgactcggctacgaccgcgagtcgtaccgcgaggcgctggcg
gcggcgttgcgctcctgcggcgtcacgccgtag
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