KEGG   Haloplanus rubicundus CBA1113: DU500_02315
Entry
DU500_02315       CDS       T05613                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
haj  Haloplanus rubicundus CBA1113
Pathway
haj03030  DNA replication
Brite
KEGG Orthology (KO) [BR:haj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU500_02315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haj03032]
    DU500_02315
DNA replication proteins [BR:haj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     DU500_02315
SSDB
Motif
Pfam: Rep_fac_C Intein_splicing LAGLIDADG_3 AAA DNA_pol3_delta2 AAA_assoc_2 RCF1-5-like_lid RuvB_N Rad17 DNAX_ATPase_lid Gp44_lid
Other DBs
NCBI-ProteinID: AXG05356
UniProt: A0A345DZI4
LinkDB
Position
complement(455204..458254)
AA seq 1016 aa
MSDPEGATGREIWIEKYRPETLDDVKGQDDIVDRLRSYIAQDDLPHLLFSGPAGVGKCVT
GETPVLTNRGVERIGDVVGEVDGFEEPDAGVEVLTFRDDGSFEFTTPSHVFGKTTDDLVR
VTTRDGNDLTVTPEHRLLAVTHDGLEWVRAGNLSAGTRVVRPRRTPLPEGDGHLDWMDAM
DGDRTVVHVTESFAADHDIPVEENYVGKKKRAVAGFRRGESDATIAAAAGTTTKTVRSYR
RNLDTALDEPSTVCSLSYLRGLDVSRDELRTHVTAVQYVTRNNQRSEPITPPWELTPALA
SFVGLAVSEARIDGGRVKFYNTDDDLLDRFETVAESVFGLEPREGTQDDVPYRELHTRTL
THFLDACFDVGGGTVGIGSTLVRADEASRAAFLRAVFDAEAHVTEHGIIELTQKDEHLVT
LLSYLLSGFGIPSRRKRERKAPTNGSGTAREYHTLYVSSARHLERFADHVGFTLDEKAER
LATNAARDPNPNDDTVPTQAAVDTLCEQLYLTKGDYVPDSLNPDTPGREQYLDCVDELVD
AATARLDDAQRTLERIDELAADLDAVAAIPATWIGTRGELEPIETRRTLAAQVGVRSDRL
LEYADGRRTPSSDRTVELLDQLHEDGVDVEHVRATLRNAIETLDVPYAHVADGTDMHGTD
VQSLLDGGNDLGSLTRFRTIADRVRSIASGLPSAAVLDALTTLHTLTSGDLYFDEVESVE
SVDEPRRVYDLTVPETRNYVAGGVPSVMHNTTCATAIAREVYGDDWRGNFLELNASDQRG
IDVVRDRIKNFARASFGGFDYRIIFLDEADSLTDAAQSALRRTMEQFADNTRFILSCNYS
SRIIDPIQSRCAVFRFSPLPDEAIAAQAREIAEAEGIEMTEDGLDALVYAAGGDMRRVIN
TLQAAATTGDVVDDEAVYLVTSTARPEEIESMVEAAIEGDFPRARSTLETLLVDSGMAGG
DVIDQLHRSAWEFDLDDRRTVQLMERLGEADYRITEGANERVQLEAMLAALALEDE
NT seq 3051 nt   +upstreamnt  +downstreamnt
atgagcgaccccgagggggcgacgggccgggaaatctggatcgagaagtaccgtccggag
accctcgacgacgtgaagggacaggacgacatcgtcgaccgcctgcggagctacatcgca
caggacgaccttccgcacctcctgttttcgggtccggccggggttggcaagtgcgtaacc
ggcgagacgccggtcctgacgaaccgtggcgtcgagcgaatcggtgacgtcgtcggggag
gtggacgggttcgaagagccggacgcgggggtggaagtgttgacgttccgcgacgacggg
tcgttcgaattcacgacgccgtcgcacgtcttcggaaagacgacggacgacctcgtccgt
gtcacgacgcgagacggaaatgacctgaccgtaacgccggaacacagactcctggccgtg
actcacgacggactggagtgggtgcgtgccggcaacctctccgccgggacccgcgtcgtc
cgtccccgccgaacgccgctgcccgagggcgacggtcacctcgactggatggacgcgatg
gacggtgaccgaaccgtcgttcacgtcacggagtcgttcgccgccgaccacgacatcccg
gtcgaggagaactacgtcggcaaaaagaagcgcgcggtcgccggcttccgacgtggggaa
tcggacgccactatcgcggccgccgccggcactacgacgaagactgtccgatcgtaccgc
cggaatctcgacaccgcgctggacgaaccgagcaccgtctgctcgctgtcgtacctccgc
ggcctcgacgtttcccgcgacgaactacgcacgcacgtcaccgccgtccagtacgtcacc
cggaacaaccagcgttccgagccgatcacgccgccgtgggaactcacgcctgcgctggcg
tctttcgtcgggctggccgtgagcgaggcccgaatcgacggcggtcgggtgaagttctac
aacacggacgacgacctgctcgaccggttcgagaccgtcgccgagtcggtgttcggtctc
gaaccacgggagggaacacaggacgacgttccgtaccgcgagcttcacacgcggacgctg
acgcacttcctcgacgcctgtttcgacgtcggcggcgggacggtcggcatcggttccacg
ctcgtccgcgccgacgaggcgagtcgggcggcgttcctccgtgccgtcttcgacgccgag
gcccacgttaccgaacacgggatcatcgagttgacacagaaggacgaacacctcgtcacg
ctcctctcgtacttgctctcgggattcggcatcccgagtcgacgcaagcgcgagcggaag
gcgccgacgaacggttcggggactgcacgcgagtatcacacgctgtacgtctccagcgcc
cgccatctcgaacggttcgcggaccacgtcggcttcacgctcgacgagaaggcggaacgg
ctcgccaccaacgctgcccgcgacccgaatccgaacgacgatacggtaccgacacaggcc
gccgtcgatacgctctgtgagcagctctacctgacgaaaggcgactacgtccccgacagt
ctgaaccccgacacccccggtcgagagcagtatctcgactgcgtcgacgaactcgtcgac
gcggcgacggcgcgtctcgacgacgcacagcgaacgctcgaacggatcgacgaactcgcc
gcggacctcgatgcagtcgctgcgattcctgcgacgtggatcggcacgcgcggcgaactg
gagccaatcgagacgcgacgaaccctcgccgcgcaggtcggcgtccgatccgaccgacta
ctggagtacgcagacggtcgccgaacgcccagcagcgaccgaacggtcgaactgctcgat
cagcttcacgaggatggcgtcgacgtcgagcacgttcgagcgacgctccggaacgccatc
gagacgctggacgttccctacgcacacgtcgcggacggaacggacatgcacgggacggac
gtacagagcctcctcgacggtggcaacgatctcgggtcgctgacgcggttccgaaccatc
gcggatcgcgttcggtcgatcgcgtccggcctcccgtccgcggcggtcctcgacgcactc
acgacgttacacacgctcaccagcggcgacctctatttcgacgaggtcgaatccgtcgag
tcggtcgacgaaccccggcgcgtgtacgatctcaccgtccccgagacccgcaactacgtc
gccggtggcgtgccgtcggtgatgcacaacaccacctgcgccacggccatcgcccgcgag
gtgtacggcgacgactggcggggcaacttcctcgaactcaacgcctccgaccagcgcggc
atcgacgtggtgcgcgaccggatcaagaacttcgcgcgcgcctcctttggcggcttcgac
tatcgaatcatctttctcgacgaggcagactctcttactgatgcggcccagtcagccctc
cgccgcacgatggagcagttcgccgacaacacccgcttcatcctctcgtgtaactactcc
agccggatcatcgaccccatccagtcccggtgtgccgtgttccggttctccccgcttccg
gacgaggccatcgcggcgcaggcccgggaaatcgcggaggccgaaggcatcgagatgacc
gaagacggtctcgacgccctcgtctacgccgccgggggcgacatgcggcgggtgatcaac
acgcttcaggcggcggcgacgacgggcgacgtcgtcgacgacgaggcggtgtatctggtg
acgagtaccgcccggcccgaggagatcgagtccatggtcgaggccgccatcgagggcgac
ttcccgcgggcgcgctccaccctggagactctcctcgtcgactccgggatggccggcggc
gacgtgatcgatcaactgcaccggtcggcgtgggagttcgacctcgacgaccgccggacc
gtccagttgatggaacggctcggcgaggccgactaccgcatcaccgagggggcgaacgag
cgggtgcagttggaggcgatgctggcggcgctggcgctcgaagacgagtga

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