Haloplanus rubicundus CBA1113: DU500_02575
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Entry
DU500_02575 CDS
T05613
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU500_02575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haj03021
]
DU500_02575
Transcription machinery [BR:
haj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU500_02575
Prokaryotic type
Archaeal type
TFB
DU500_02575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Trm112p
Sigma70_r4
Cyclin_N
Herpes_IE68
Zn_ribbon_IS1595
DZR
DZR_2
DUF1272
C1_1
Auto_anti-p27
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AXG05405
UniProt:
A0A345DZN3
LinkDB
All DBs
Position
complement(512083..513066)
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AA seq
327 aa
AA seq
DB search
MTETRVWTSSDSAVGERERPASESEQEHVCPECGGTLVTDEEHGETACSDCGLVVEEDGI
DHGPEWRAFDSRERDRKARVGSPTTKMMHDKGLSTTIDWQNKDAYGKTLSAAQRRKMQRL
RTWNRRFQTSDHQERNLRQALGEIDRMASALGLPETVRETASVIYRRALEEDLLPGRSIE
GVATSALYAAARQAGVPRTIDEVARVSRVDEEEFKRTYRYVVRELNLEVAPADPVSYVTR
FASELDLSDEAERLAREMLDAAKDRGIHSGKNPVGLAAAAVYAAPLLTNESVTQGQVSEV
ADISEVTIRNRYRELLAAYEDASAETA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacacgcgtctggacgagcagcgactcggcggtcggcgagcgagagcgaccg
gcgagcgaatcggagcaggaacacgtctgtcccgagtgtggcggcacgctcgtgaccgac
gaggaacacggcgagactgcctgcagcgactgcggcctcgtcgtcgaggaggacggcatc
gaccacggtcccgagtggcgcgcgttcgactcgcgggagcgcgaccggaaggctcgcgtc
gggtcgcccacgacgaagatgatgcacgacaaggggctgtcgaccaccatcgactggcag
aacaaggacgcctacggcaagaccctctcggccgcccagcgccggaagatgcagcgcctg
cgcacctggaaccgccggttccagaccagcgatcaccaggagcgcaacctgcggcaggcg
ctcggcgaaatcgaccggatggcgtcggcgctcggtctccccgaaaccgtccgcgagacg
gcgtcggtcatctaccgccgcgcgctggaagaggacctcctgcccggccgctcgatcgag
ggcgtcgccaccagtgcgctctacgccgcggcccgacaggccggggtcccccggaccatc
gacgaggtggcccgcgtcagccgcgtcgacgaggaggagttcaagcgcacctaccgctac
gtggtgcgcgaactcaacctcgaagtcgcgcccgcggatcccgtgagctacgtcacccgg
ttcgcgtcggagctcgacctctcggacgaggccgaacgcctcgcgcgcgagatgctcgac
gccgccaaggatcggggcatccacagcggcaagaaccccgtcggtctcgctgccgccgcc
gtctacgccgcgcccctcctcaccaacgagtcggtgacgcagggccaggtgagcgaagtg
gccgacatctcggaagtgaccatccgcaaccgctaccgcgaactcctcgcggcctacgag
gacgcgagcgccgagacggcctga
DBGET
integrated database retrieval system
