KEGG   Haloplanus rubicundus CBA1113: DU500_02580
Entry
DU500_02580       CDS       T05613                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
haj  Haloplanus rubicundus CBA1113
Pathway
haj03030  DNA replication
haj03410  Base excision repair
haj03420  Nucleotide excision repair
haj03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:haj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DU500_02580
   03410 Base excision repair
    DU500_02580
   03420 Nucleotide excision repair
    DU500_02580
   03430 Mismatch repair
    DU500_02580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:haj03032]
    DU500_02580
   03400 DNA repair and recombination proteins [BR:haj03400]
    DU500_02580
DNA replication proteins [BR:haj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DU500_02580
DNA repair and recombination proteins [BR:haj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DU500_02580
   MMR (mismatch excision repair)
    Other MMR factors
     DU500_02580
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    DU500_02580
SSDB
Motif
Pfam: PCNA_N PCNA_C
Other DBs
NCBI-ProteinID: AXG05406
UniProt: A0A345DZN4
LinkDB
Position
complement(513370..514113)
AA seq 247 aa
MFKAIVSASTLRDALDSVSVLVDECKVRLNEDGLSIRAVDPANVGMVDLSLDSAAFESYE
ADGGVIGVNLARLEDIAGMGNAGDLVHLELDEETRKLHIRIDGLSYTLALIDPDSIRQEP
DIPDLDLPARIVVEGNQLDRGITAADMVSDHINLRVDEDAETFHIEAEGDTDDVDFELGT
DVLIDLEAGPADSLFSLDYLKDMNKAIPGDAEVTIELGEEFPVKLHYEFAEGLGNVTFML
APRIQSD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgttcaaggccatcgtgagcgcgtcgacgctccgggatgccctcgactccgtgagcgtg
ctggtcgacgagtgcaaggtacggctcaacgaggacggcctgtcgatccgtgcggtcgat
ccggcgaacgtgggcatggtcgatctctcgctcgattcggccgccttcgagtcctacgag
gccgacggcggtgtcatcggcgtcaacctcgcccgtctcgaagacatcgccggtatgggc
aacgcgggggacctcgttcacctcgaactcgacgaggagacccgcaagctccacatccgc
atcgacgggctgtcctacacgctcgcgttgatcgaccccgactcgatccggcaggagccg
gacatccccgacctcgacctgccggcacggatcgtcgtcgagggcaaccagctcgaccgc
gggatcacggccgcggacatggtctccgatcacatcaacctccgcgtcgacgaggacgcc
gaaaccttccacatcgaggccgaaggcgacaccgacgacgtggacttcgaactcgggacc
gacgtcctcatcgatctggaggccggcccggccgactcgctgttctcgctcgactacctc
aaggatatgaacaaggcgatccccggcgacgccgaggtcaccatcgaactcggcgaggag
ttcccggtgaagctgcactacgagttcgccgagggtctcggcaacgtgaccttcatgctc
gcgccgcgcatccagagcgactga

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