Haloplanus rubicundus CBA1113: DU500_04115
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Entry
DU500_04115 CDS
T05613
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DU500_04115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haj03400
]
DU500_04115
DNA repair and recombination proteins [BR:
haj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DU500_04115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AXG05685
UniProt:
A0A345E0G3
LinkDB
All DBs
Position
836547..839252
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AA seq
901 aa
AA seq
DB search
MNADADTDADADGNASAVTGPPDGMVDARDDLTPMLSQYFERCAEYEDALLLFQNGDFYQ
TYCDAAEEVARVCELTLTQREDSTGTYPMAGIPVDNAATYVERLLDAGYRVAVAEQVERP
EAASGLVDRAVTQVITPGTVVDDELLGTGTTNYVAAVTREGETRGVAAVDAATGECLVTS
VGDEAGLYAELDRLAPAELLVGSDAAVDAAALAAAPMVTDHEAAAMDADAATETLSSYVA
RPDAVVAGDAERRACGAALAYAEWTQGDDGPLEYVTRIRRHDPRESLGLDSAAIRSLELF
ENRGAGASETLFDVLDDTACALGRRKLDGWLRRPLVDRDAIEARLDAVAALTDDALAREA
IRDALRAVYDLERLAGRVSRGRADARDLRSLQATLDAVPAVLDGLADVDAESARLDELRE
RIDPVDDARDLIERAIRPDPPVEVTEGGVIREGFDDELDRLRETEREGRAWVAELEARER
ERTGIDSLSVGHNQVHGYYIEVTDPNLDRVPDDYTRRQTLKNAERFYTPELKRREDEILG
AAERADTLEYERFREVRASVAAETDRIQAVADALAELDALAALAAVAVDRNYARPTFHDG
GIDVEAGRHPVVEVTQDRFVPNDAELPPGSVSLVTGPNMSGKSTYMRQVALIAVLAQVGS
FVPADAARLPVVDRVFTRVGASDDIAGGQSTFMREMSELTSILHEATPDSLVLLDEVGRG
TSTADGRAIARATAEFLHDEVGATTLFATHYHDLTGLAEEYARVRNLHFAAERAEPRAAG
SRPAADGDDVTFLHRVAEGPASSSYGVEVARMAGVPAPVVERSRALVDGAGPETNGHDEG
VQVTLSGVGPDGVDRAADGDADADDEVDADLVAILREVDLARTTPIEALNLLADLQDRVD
E
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggacgccgacacggacgccgacgccgacgggaacgcgagcgccgtcaccggc
ccacccgacggcatggtcgacgcccgcgacgacctgacgccgatgttgagtcagtacttc
gagcgctgtgcggagtacgaggacgccctcctcctcttccagaacggcgacttctaccag
acctactgcgacgccgccgaggaggtggcgcgggtgtgcgaactcacgcttacccagcgc
gaggacagcaccggcacctacccgatggcgggcatccccgtcgacaacgccgccacgtac
gtcgaacgcttgctggacgcgggctaccgcgtcgccgtcgcggaacaggtcgaacgaccc
gaggcggcgtcgggcctcgtcgaccgcgcggtcacgcaggtgatcacgccgggtaccgtc
gtcgacgacgagttgctggggacggggacgacaaactacgtcgcggcggtgacccgcgag
ggcgagacccgcggcgtcgcggccgtcgacgccgccaccggcgagtgtctggtgacgagc
gtcggcgacgaggccgggctgtacgccgaactcgaccgcctcgcgcccgcggaactgctc
gtcggctccgacgcggccgtcgacgccgcggcgctcgccgccgcgccgatggtgaccgac
cacgaggcggcggcgatggacgccgacgccgcgacggagacgctctcgtcgtacgtcgcc
cggcccgacgcggtggtcgcaggcgacgccgagcgccgggcctgcggcgccgccctcgcc
tacgccgagtggacgcagggcgacgacggtcccctcgaatacgtcacgcgcatccgccgt
cacgacccgcgcgagtcgctaggcctcgattcggcggccatccggagcctcgaactgttc
gagaaccggggcgccggagcgagcgagacgctcttcgacgtactcgacgacacggcctgc
gcgctcggccgccggaaactcgacggctggctccgccgaccgctcgtcgaccgcgacgct
atcgaggcgcgactcgacgccgtggcggccctcacagacgacgccctcgcccgcgaggcg
atccgcgacgcgctccgggcggtgtacgacctcgaacgcctcgccggccgggtgtcccgc
ggccgggcggacgcccgcgacctgcgttccctgcaggcgacgctcgacgccgtgcccgcg
gtgctggacgggctggccgacgtggacgccgagtcggctcgcctcgacgagttgcgcgaa
cggatcgatcccgtcgacgacgcccgcgacctgatcgagcgggcgatccgccccgacccg
ccggtcgaggtgaccgagggcggcgtgatccgcgagggcttcgacgacgaactcgaccga
ctccgagagaccgaacgcgagggccgggcgtgggtggccgaactcgaagcccgcgagcgg
gagcgaaccggcatcgactccctctcggtcggtcacaatcaggtccacggctactacatc
gaggtgaccgatcccaacctcgaccgggtgcccgacgactacacgcgccggcagacgttg
aagaacgccgaacggttctacacgccggagctgaagcgccgcgaggacgagattctggga
gcggccgagcgggccgacaccctagagtacgagcgcttccgcgaggtccgggcgtcggtc
gcggcggagacggaccggatacaggcggtggcggacgccctcgccgaactcgatgccctc
gcggcgctcgcggccgtcgccgtcgaccggaactacgcgcggccgacgttccacgacggg
gggatcgacgtcgaggcgggtcggcaccccgtcgtcgaggtgacacaggaccgcttcgtc
cccaacgacgcggagttgccgcccgggagcgtcagcctcgtcaccggcccgaacatgagc
gggaagtcgacgtatatgcggcaggtggcgctgatcgccgtcctcgcgcaggtcgggagt
ttcgtccccgccgacgccgcccgcctccccgtggtcgaccgggtgttcacccgcgtcggc
gccagcgacgacatcgcgggcggccagtccacgttcatgcgcgagatgagcgaactcacc
tcgatcctccacgaggcgacgccggattccctcgttctcctggacgaggtgggacgcggc
accagtaccgcggacggccgcgccatcgcccgtgccaccgccgagttcctccacgacgag
gtgggcgcgacgacgctctttgccacccactaccacgacctgacgggactggccgaggag
tacgcccgggtgcggaacctgcatttcgcggccgaacgtgcggagccacgcgccgcgggg
agtcggccggcggccgacggggacgacgtgaccttcctccaccgggtcgcggagggaccg
gcctcgtcgtcctacggcgtcgaggtggcgcggatggccggggtgccggctcccgtcgtc
gagcggtcgcgggcgctcgtcgacggcgccggccccgagacgaacgggcacgacgagggg
gtgcaggtgacgctttccggcgtcggcccggacggggtcgacagggcggcggacggcgac
gcggacgccgacgacgaagtggacgccgacctcgtcgccatcctccgcgaagtcgacctc
gcgcggacgacgcccatcgaggcgttgaacctgctggcggacctgcaagatcgggtcgac
gaatga
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