Haloplanus rubicundus CBA1113: DU500_05970
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Entry
DU500_05970 CDS
T05613
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU500_05970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haj03021
]
DU500_05970
Transcription machinery [BR:
haj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU500_05970
Prokaryotic type
Archaeal type
TFB
DU500_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_3
Cyclin_C
FYVE
TackOD1
BRF2-like_C_cyclin_rpt
Cas12f1-like_TNB
Motif
Other DBs
NCBI-ProteinID:
AXG06027
UniProt:
A0A345E1F5
LinkDB
All DBs
Position
complement(1183899..1184876)
Genome browser
AA seq
325 aa
AA seq
DB search
MQPGDSYETGFDESAGKTINSTATCPECDGTVVADAGERHCTDCGLIIDEYHIDHGATKR
QAPESETDPSHVGAPRTKTMHDGGLTTRIGRRRDGAGQKLDGARRRRLRRLRTQHRRARH
GSKRERNLELGLREASRMTGALGLSESLAEQSAVIFRRAQAADLLLGRSIEGVAAASVYA
ACRCAGLPRAIDEVGDVARVSTERVRNAYGVLNEGLGLPTRPQTPRDFVPKFASALDVKA
ETRKRALDLAERAVETGVANGRQPSGIAAACLYQATRECGATRTQAELAALADVTTVTLR
TGWHDLRNVLQTTETRADVDAAEGC
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaggcgatagctacgagacgggctttgacgaatcggcaggaaaaacgattaac
tcgacagcgacgtgtccggaatgcgacgggacggtggtcgctgacgcgggtgagcgacat
tgtacagactgcgggctaattatcgacgagtaccacatcgaccacggggcaacgaagcga
caagcaccggagtcggagaccgatccgagtcacgtcggcgcgccacggacgaagacgatg
cacgatggtggcctcacgacgcgaatcggtcggcgtcgagacggagcgggccagaagctc
gacggagcgcggcggcgccggctgcgacggctgcgaacccagcaccggcgagcgcgacac
gggtcgaagcgcgaacggaacctcgaactgggactgcgggaggcgtcgcggatgactggt
gccctcggtctgtcggaatcactggcagaacagtcggcagtcatctttcgacgggcacag
gccgcggacctccttcttgggcgatcaatcgagggcgtcgctgctgcgagcgtgtacgca
gcgtgtcggtgtgctggactgccccgcgcaatcgacgaggtgggagatgtcgcgcgtgtc
tcgacggagcgcgtccgcaacgcgtacggcgtcctcaacgagggccttggactcccgacg
agaccacagacaccgcgtgacttcgtgccgaaattcgcctctgcactggatgtcaaggcc
gagactcgaaaacgggcacttgatctcgcggaacgcgctgtcgagacgggcgtcgcgaat
gggcggcaaccgtcgggcatcgcggcggcgtgtctgtatcaggcgacacgcgagtgtggc
gcgacccgaacgcaggcggaactggccgctctggcggacgtgacgacggtgacgttacga
accgggtggcacgacctccgtaacgtgctccagacgaccgagacacgtgccgacgtggac
gcggcggaggggtgctga
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