Haloplanus rubicundus CBA1113: DU500_08520
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Entry
DU500_08520 CDS
T05613
Name
(GenBank) transcription initiation factor IIB 3
KO
K03124
transcription initiation factor TFIIB
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU500_08520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haj03021
]
DU500_08520
Transcription machinery [BR:
haj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU500_08520
Prokaryotic type
Archaeal type
TFB
DU500_08520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
AXG06458
UniProt:
A0A345E2N6
LinkDB
All DBs
Position
1712897..1713865
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AA seq
322 aa
AA seq
DB search
MTRPTRQRDDRTRWQGEEEEDEADEDVDVDDLDPEDLVRTADGELIHEETGLIVEEEQID
PGPEWRAFNHQERQEKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSRKRSQMHRLR
KWQERIRTKDAGERNLQFALSEVDRMASALGVPRSVREVASVIYRRALNEDLIRGRSIEG
VATAALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMKPVDPKKYVPRF
CSELDLSEEVQVKANEIIEETAEKGLLSGKSPTGYAAAAIYAASLLCNEKKTQREVADVA
QVTEVTIRNRYQEQIEAMGIHS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacacggcccacccgccagcgggacgaccggacgcgatggcagggcgaggaggaggag
gacgaagccgacgaggacgtcgacgtcgacgacctcgaccccgaggacctcgtcaggacg
gccgatggcgaactgattcacgaagagaccgggctcatcgtcgaggaggaacagatcgat
cccggcccggagtggcgggcgttcaaccaccaggaacgacaggagaaatcgcgggtgggc
gccccgaccacccagacgatgcacgacaaggggctgacgacgaccatcgactggaaagac
aaggacgcctacggacgctctatctcctcacgaaagcgctcgcagatgcaccgcctgcgg
aagtggcaagagcggattcggacgaaggacgcgggcgagcgcaacctccagttcgcgctc
tcggaggtcgaccggatggcctccgcgctcggcgttcctcgatccgtgcgtgaggtggcc
tccgtcatctaccgacgcgcgctcaacgaggatctgattcgggggcgctccatcgagggc
gtcgccaccgccgcgctctacgccgcctgtcgaaaggagggcatcccccgctcgctggag
gagatttcggaggtgtcgcgggtcgagcgcaaggagatcggtcgcacctaccgctacatc
tcccaggaactcggcttggagatgaaacccgtcgacccgaagaagtacgtcccccgcttc
tgctcggaactcgacctcagcgaggaagtgcaggtgaaggccaacgagatcatcgaagag
accgccgagaagggactgctctcggggaaatcgcccaccggctacgccgccgccgccatc
tacgccgcgtccctgctctgtaacgagaagaagacccagcgggaggtggccgacgtggcc
caggtgaccgaagtcaccatccggaaccggtatcaggaacagatcgaggcgatgggtatc
cacagctag
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integrated database retrieval system
