Haloplanus rubicundus CBA1113: DU500_10555
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Entry
DU500_10555 CDS
T05613
Name
(GenBank) PAS domain S-box protein
KO
K06930
HTH-type transcriptional regulator, bacterioopsin transcriptional activator and related proteins
Organism
haj
Haloplanus rubicundus CBA1113
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
haj03000
]
DU500_10555
Transcription factors [BR:
haj03000
]
Prokaryotic type
Helix-turn-helix
Other families
DU500_10555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GAF_2
BAT
PAS_9
PAS
GAF
HTH_10
PAS_8
PAS_4
GAF_3
PAS_3
Diguanyl_cycl_sensor
Sigma70_r4
LexA_DNA_bind
Motif
Other DBs
NCBI-ProteinID:
AXG06834
UniProt:
A0A345E3R2
LinkDB
All DBs
Position
complement(2101242..2104220)
Genome browser
AA seq
992 aa
AA seq
DB search
MDDDEAALVEVQSRIGGAATIADIYRVAAETGGRVFDCDACELLVEEGGSVDLAERFVPD
GIDPPPGGATSPAIATHTYRSGEPMLIDDTHRDDRVDTDTDYRSILSVPLLPHAVIQFLD
RDPNAFDDRTLALAAVFGGYVAHELDLRVSERQATAGDVLSAESTERLFDLVDVLVVAID
NEGRITFVNRQARETLGYEEGALVDRDWFDTCLPEPRRDEVRGVFERVMAGELDSVGRYE
NAIVTAEGDERIVEWYNTVLRDADGTITGTLSCGLDVTDREERERELTAAWRRYRTLLQA
APNPIFVADAETGEIVEVNEAAAEFRGQAREEIVGLHQTDLHPEEETEHYRDLFERHVSE
GGTKRRLPDGSPIYAVTADGDRVPVEISVEMVELEVETVIYGVFRDISDQLAYEQALTGI
NEAARDLFEGKLPSEVADVTVETVTEILDPTGAVVYLADEGAGTLRPAAYGPPKATDLIG
EPPVFEPADSIAWRVFVDGETAVFDDVREAEGVYNPETPIRSEIIVPLGEYGVLLVGHTE
TAAFDDRAVELAEILGATAEVALEHAEHERHIEDQTRQLKQRAQQLERVESINTRIRDVA
RAVVQSTTRGEVERTVCAELVEDDAFALAWIGAIDPVDDRLDVRAWAGDAQEYLDRVPLS
LDDANAEPAVRTALSKEPTVVRNTATNVTKEAWRSEAVRRDFRSVASVPLVYQHSLQGVL
TIYATTQSAFSGVLQSVLTELGDLLAHAITAIERKQTLLTNQAIELDFEILDRGCLFLRF
TQETGCALDVEAIVPQSDDSWLVFVRVQNGAADQLLDAAEAATALASARLIDPADESLVQ
LRFVEPFIASVLADQGIAVRDISADGDACRVTVAVPPTFDIRRAIDVVSTTYPDSELVAK
REHTPSADVSKSLTLRGLEKLTPRQREVLEVAYHRGYFDSPKKASGEELAAEFGFSPSAF
HRHIRAAERKLFDTVFRNETAVSREYGDGPGG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacgaggcggcactcgtcgaggtacagtcacgcatcgggggcgccgccacc
atcgccgacatctaccgcgtagcggccgaaacgggcgggcgggtgttcgactgtgacgcg
tgtgaacttctcgtcgaggagggcgggtcggtcgacctcgccgaacggttcgtccccgac
ggcatcgacccgccgcccggcggggcgacgagcccggccatcgcgacccacacgtaccgg
tcgggcgaaccgatgctgatcgacgacacgcaccgagacgatcgggtcgacaccgacacc
gactaccggtcgatcctgagcgttccccttctgccgcacgccgtcatccagtttctcgac
cgcgatccaaacgcgttcgacgaccgcaccctcgcactcgccgccgtcttcggcggctac
gtcgcccacgaactcgacctgcgggtgagcgagcggcaggcgacggccggagacgtcctt
tcggccgagtcgacggagcggctcttcgacttggtcgacgtactcgtcgtcgccatcgac
aacgagggtcgaatcacgttcgtcaaccgccaggcacgggagacgctgggctacgaggag
ggggcgctcgtcgaccgggactggttcgatacgtgtctgcccgagccgcgccgcgacgag
gtacgcggcgtgttcgaacgcgtcatggccggcgaactcgactcggtcggccggtacgag
aacgccatcgtcacggccgagggggacgaacggatcgtcgagtggtacaacacggtgctc
cgtgacgccgacgggacgatcacgggaacactgagttgtggactggacgtgacggatcgc
gaggagcgcgagcgcgaactcacggcggcgtggaggcgctaccggacactcctgcaggcg
gcaccgaatccgatcttcgtcgcggacgccgagacgggcgagatcgtcgaggtcaacgag
gcggcggccgagttccgtggccaggcgcgcgaggaaatcgtcggtcttcaccagacggat
ctccaccccgaggaagagaccgagcactaccgcgacctgttcgagcgacacgtgagcgag
ggcgggaccaaacgacggctgccggacggctcaccaatctacgcggtcacggccgacggg
gaccgcgtcccggtcgagatcagcgtcgaaatggtcgagctcgaagttgagacggtcatt
tacggggtctttcgcgacatcagcgaccaactggcctacgaacaggcgctaaccgggatc
aacgaggcggcccgtgatctcttcgagggaaagctgccgtccgaagttgccgacgtgacc
gtcgagacggtgacggagattctcgatcccaccggagcagtcgtgtatctcgccgacgag
ggggctggaacgctgcgtccggccgcgtacggaccgccgaaagcgaccgacctgatcggc
gagccgccggtgttcgaaccggccgacagtatcgcgtggcgggtgttcgtcgacggagag
acggcggtgttcgacgacgtgcgggaggcggagggcgtctacaatcccgagacgccgatc
cggagcgagatcatcgtcccactcggcgagtacggcgtcttgctcgtcgggcacacggag
acggcggcgttcgacgaccgggcggtcgaactcgcggaaattctgggggcgacggccgaa
gtcgcgctcgaacacgccgaacacgagcgacatatagaagaccagacacgtcagctgaaa
cagcgagcccagcaactcgaacgcgtcgagtcgatcaatacgcgcatccgtgacgtcgca
cgggccgtcgtccagtcgacgacgcggggagaagtcgagcggaccgtgtgtgccgaactg
gtcgaggacgacgcgttcgccctcgcgtggatcggggcgatcgacccggtcgacgaccga
ctcgacgtccgcgcgtgggccggcgacgcacaggagtatctcgaccgcgtcccgctctcg
ctcgacgacgcgaacgccgaaccggccgtacggacggcgctatcgaaggaaccgacggtc
gtgcgaaatacggcgacgaacgtgaccaaggaggcgtggcgttcggaggccgttcggcgc
gacttccgctccgtcgcgagcgtgcccctcgtctaccagcactcccttcagggggtgctc
accatctacgcgacgacacagtccgcgttctccggcgtcctgcagtccgtcctgacggaa
ctgggggatctactcgcccacgcgattacggcgatcgagcgcaagcagacactcctgacg
aaccaagcgatcgaactcgacttcgaaatcttggatcggggctgcctgttcttgcgattc
acgcaggagacgggctgcgcgctggacgtcgaagccatcgttccccagtcggacgactcg
tggctcgtattcgtgagggtgcagaacggggcagccgaccagttactcgacgcggcagag
gcggcgacggccctcgcgagcgcccgactcatcgatcccgcggacgagtcgctcgtccaa
ctccggttcgtcgaaccgttcatcgcgtcggtgctggcggatcaaggaatcgcggttcgc
gacatctcggccgacggcgacgcctgccgcgttaccgtcgcggtgccgccgacgttcgac
atccggagagcgatcgacgtggtgtcgaccacctatcccgactccgaactggtcgcgaaa
cgcgagcacaccccgtcggcggacgtgagcaaaagtctcacgctgcgggggctggagaaa
ctcaccccccgtcagcgggaggtcctcgaagtcgcctaccaccggggctacttcgactcc
ccgaagaaggcgagcggcgaggaactggcggcggagttcggcttctcgccgtcggctttc
caccgacacatccgcgccgccgagcggaaactgttcgacaccgtgttccggaacgagacg
gccgtctcgcgggagtacggggacggtcccgggggatag
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