Haloplanus rubicundus CBA1113: DU500_11305
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Entry
DU500_11305 CDS
T05613
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU500_11305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haj03021
]
DU500_11305
Transcription machinery [BR:
haj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU500_11305
Prokaryotic type
Archaeal type
TFB
DU500_11305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Sigma70_r4
HTH_Tnp_ISL3
Cyclin_N
Zn_ribbon_tTFIIB
A2L_zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
AXG06965
UniProt:
A0A345E443
LinkDB
All DBs
Position
complement(2244264..2245241)
Genome browser
AA seq
325 aa
AA seq
DB search
MSDTTTYRTDATEREQERTEGERTGTTPACPECTGNLVTDEEHGETVCGDCGLVVESDEI
DHGPEWRAFDSSERDSKSRVGAPTTTMMHDRGLSTNIGWQNKDAYGRALSSRQREKMQRL
RTWNERFRTRNSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALAEDLLPGRSIE
GVATAALYAAARQAGTPRSLDEIATVSRVEKMELTRTYRYVVRELKLEIQPADPEQYVPR
FASELGLSEEATRQARELLQSSRDAGVHSGKSPVGLAAAAVYAAALLTNETVTQSEVSAV
ANISEVTIRNRYKELLEAKGAADAQ
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataccacgacctaccgaacggacgcgacggaacgagaacaggaacggacagag
ggcgaacggaccgggacgacgccggcctgcccggagtgtaccggcaacctcgtcaccgac
gaggaacacggcgagacggtgtgtggcgactgcggcctggtcgtcgagtcggacgaaatc
gaccacggtcccgagtggcgcgccttcgattcgagcgagcgcgactccaagtcacgcgtc
ggtgcgccgacgacgacgatgatgcacgaccgggggctgtcgacgaacatcggctggcag
aacaaggacgcctacgggcgggcgctctcctcgcgccagcgcgagaagatgcagcgtctg
cgcacctggaacgagcggttccggacccgaaactcgaaagagcgcaatctgaagcaggcg
ctcggcgaaatcgaccggatggcgtcggcgctcggtctccccgagaacgtccgcgaaacc
gcgtcggtgatctaccgccgcgcgctcgccgaggacctcctgcccggccgctccatcgag
ggtgtcgccaccgcggcgctgtacgcggcggcacgacaggccggcacgccccggagcctc
gacgaaatcgccaccgtctcccgcgtcgagaagatggaactgacacggacgtaccgctac
gtcgtccgcgaactcaaactggagatccagcccgcggaccccgagcagtacgtcccccgc
tttgcctccgaactcggactctccgaggaagcgacccgacaggctcgcgaactcctccag
tcctcccgcgacgccggcgtccacagcggcaagagtccggtcggcctcgcggccgccgcc
gtctacgccgccgccctcctcaccaacgagacggtgacccagagcgaagtgagcgcagtg
gccaacatcagcgaggtcaccatccgcaaccggtacaaggagctgctggaagcgaaaggc
gcggcggacgctcagtag
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integrated database retrieval system
