Haloplanus rubicundus CBA1113: DU500_15285
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Entry
DU500_15285 CDS
T05613
Name
(GenBank) recombinase RecA
KO
K08482
circadian clock protein KaiC
Organism
haj
Haloplanus rubicundus CBA1113
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
DU500_15285
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
RecA
DnaB_C
AAA_22
AAA_16
nSTAND3
AAA_14
ResIII
GvpD_P-loop
IstB_IS21
NACHT
CbiA
AAA_24
ATPase_2
SLFN-g3_helicase
MEDS
AAA_30
Rad51
AAA_18
TrwB_AAD_bind
T2SSE
ABC_tran
cobW
AAA_7
AAA
NB-ARC
RNA_helicase
P-loop_TraG
Herpes_TK
Motif
Other DBs
NCBI-ProteinID:
AXG08168
UniProt:
A0A345EI60
LinkDB
All DBs
Position
complement(2974282..2975736)
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AA seq
484 aa
AA seq
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MASATTSRLSTGIEGLDEILYGGFLPQRNYLVKGTAGSGKTILGLHFLQAGVDAGDPVLF
INVEEDLDDLTANADALGFDTDAIDFLDLSPTADVFVEDRTYDVFDAAEVEQEPLREAIV
DRVEALEPTRVVVDPLTQFRYLSTDDYQFRKQVVGLLRFLGQRGATVVFTAQDARNQPTE
ELEFVADGTIRLESAPYGSTVQVPKFRGSRVKSGDHAYRITDDGMAVFPALAPSDHHGTF
TTEPVSSGVVEVDELLDGGIERGTVSVISGPTGVGKTTLGTQFMNAAADRGERSVVYLFE
ESKSTFLARSEAIGIPVERMTDRGTLDVREMNALELSPQEFARIVREDVEKHDAEIVMVD
GIAGYRLTLHGETDMVLKRLHALGRYLKNMGVTTILVDETDSPTGPFTATQENISYLADN
IVFLRHLELRGELRKAIGVLKKRTGDFERTLREFEITTDGIVVGDPLTGVQGILTGRPDL
LDDE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcgacgacgagtcgactctcgacggggatcgagggtctcgacgagattctg
tacggcggattcctgcctcagcggaactacctggtgaagggaacggcggggtccgggaag
accatcctcggtctccacttcctgcaggcgggggtcgacgccggcgaccccgtgctgttc
atcaacgtcgaggaggacctcgacgacctcacggccaacgccgacgcgctcggattcgac
accgacgccatcgacttcctcgatctgagcccgaccgccgacgtgttcgtcgaggaccgg
acgtacgacgtgttcgacgcggccgaagtcgaacaggagccgctccgcgaggcaatcgtc
gaccgggtcgaggccctcgaaccgacccgggtcgtcgtcgacccgctgacgcagttccga
tatctctcgacggacgactaccagttccgcaagcaggtcgtcggcctgctgcgctttctc
ggacagcggggggcgaccgtcgtcttcaccgcacaggacgcccggaaccagccgaccgag
gaactcgagttcgtcgccgacgggacgattcgactggagtcggccccgtacggctcgacg
gtgcaggtgccgaagttccgcggatcgcgggtcaaaagcggggaccacgcctaccgcatc
actgacgacggaatggccgtcttcccggcgctggcgccgagcgaccaccacgggacgttc
acgaccgaacccgtctcctcgggcgtcgtcgaagtcgacgaactcctcgacggcggcatc
gaacgcgggacggtcagcgtcatcagcgggccgacgggcgtcgggaagacgacgctcggc
actcagttcatgaacgcggccgcggaccgcggcgagcgctcggtcgtctacctgttcgag
gagagcaagtcgacgtttctggcccgctccgaggccatcggcatccccgtcgagcggatg
accgaccgcggcacgctcgacgttcgggagatgaacgcgctggaactgtcgccccaggag
ttcgcacggatcgtccgggaggacgtggagaaacacgacgcggaaatcgtgatggtcgac
ggtatcgcggggtaccggctgacgctccacggcgagacggacatggtactcaagcggctc
cacgcgctggggcgctatctcaagaacatgggcgtgaccaccatcctcgtcgacgaaacc
gacagcccgacgggaccgttcactgcgacccaggagaacatcagctatctggccgacaac
atcgtcttccttcgccatctcgaactccgcggcgaactccggaaggccatcggcgtcctc
aaaaagcgcacgggcgacttcgagcggacgctccgcgagttcgagatcacgaccgacggc
atcgtcgtcggcgaccccctcacgggagtacaggggattctgaccgggaggccggacctc
ctcgacgacgagtga
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