Haloplanus rubicundus CBA1113: DU500_17080
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Entry
DU500_17080 CDS
T05613
Name
(GenBank) helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
haj
Haloplanus rubicundus CBA1113
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haj03400
]
DU500_17080
Enzymes [BR:
haj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DU500_17080
DNA repair and recombination proteins [BR:
haj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DU500_17080
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_22
DEAD
DUF2800
Motif
Other DBs
NCBI-ProteinID:
AXG08205
UniProt:
A0A345E7N3
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All DBs
Position
pCBA1113-01:complement(13574..17299)
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AA seq
1241 aa
AA seq
DB search
MTGTGDGPPESDSEESEGGVSPTTEQQEALTLDQNIAITAGAGTGKTTTLTLRYLEMLET
DPAVGPENIVTITFTNDAANEMQERIRSEVAGRLSQAPGSDEYDYERWRGIKDELENGYI
HTIHGFCSRLLREHVVEAPVQPEFETLDEADATVLMREVVLETIEARWETNEDIRRLARL
WNRDSLEEILVGLLGSRPMSTEWATRWEDATVEEYLDHIWATFYPVDQETTEDLLSEASV
QTALRTICDLYGEEFDIDPDDKGMELMQTISQIVRDTGILTGEAEGRDWQRAFDGICDRL
TTGSGDRYSRRYRYRGSQGNWSAHEDAQDQLDEAATALLEGLRPEDQDFMGGLDTEWNSS
HYVLSLARLYCTVLGEYEDTKADQNTLDYYDLIQTTIDFLEANDRVCDQLRSQFEYVMVD
EMQDTDSLQWDLVKLLTAGNTDDFDAQNVFLVGDEKQSVYRFRGADVTTFGSARADLDAA
NPDSVETTKQLRGNFRTIAETREFLNALFDRVFEPMEDEYRPYEARPQALTDERREGRDI
SGSVEYLLVPDDDLAQLHGDGYLDATPRFAGKGEREAHALASRLTSLLDDPPEIYDRKEE
TCRPAKPEDIAILLRARTRLKEHERALDAYDIPYTVVSGSGFWDSPEITALVNLLTFFEN
PTDDIALYGVLRSPLFGVTDETLARLHSPNDSLWAALQRADGDLGDAAGLLTEWRRLAAV
TDDVSADTTVPWGTMLSRIIDDTGYIASVGADERPRQAAVNINKFREQIRAWEEGGVKTV
SELLTRIERRKEIETHADEATIPEDADGVQIRTIHSAKGLEFPIVVVPEVGTEFNFQGDV
DEYGKVYLDELAVGDGDTEPVLGMKAPSADDPYDHDDTLARSRLRERVKMQERAELKRLL
YVAATRARDHLLFSGIHSVETDDEGSLGLKDARDPADARYWRDWLQPILLEDEEGNTSHT
LSAVASTAEHTTELAGNQFTIRLPTAPVDDWDDSGPSTHEYPEIDIPEPALSPAPVMMTA
TNFAKGLAPDAGAIYTDELAEDAEAVDSDGLPANHLGTIVHKLTEHRLPREQWRPVARRL
ASAFDETVTDDDLARIERYTERCLRFREQLVDEVTPETIHEELAVVARLDSGRIIGDIDL
LLTTPGTYHIADYKTNDTTRLAVDDLAEKYWPQLESYAVAVHQNDPSKEVRLTLYFADAD
VSKTNTLDPMTLDIMSDDLDSNLLELTGGISDGPEDIGSGY
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggaaccggtgatgggcccccggagtcggacagtgaagagagcgaaggcggcgtg
tcgccgacgacggagcagcaggaggcacttactctcgaccagaacatcgccatcacagcc
ggcgccgggaccgggaagacaaccacactgacgctccgctatctggaaatgctggagacg
gacccggcggtcgggcccgagaacatcgtcacgatcacgttcaccaacgacgccgccaac
gagatgcaggagcggattcggtcggaggtcgccggccgcctcagtcaggctccggggtcc
gatgaatacgactacgagcgatggcgtgggatcaaagacgagctggaaaacggctacatc
cacacgattcatggcttctgctcgcggctcctccgtgagcatgtcgttgaggctcccgtc
cagccggagttcgagacgctcgacgaggcggatgcgaccgtcttgatgcgggaggtcgtg
ctcgagactatcgaagcgcggtgggagacgaacgaggacattcgtcggctcgcccggctc
tggaatcgcgattcgctcgaagagattctggtcgggctgctgggcagtcgcccgatgagt
accgagtgggcgactcgctgggaagatgcgactgttgaggagtatctggaccatatctgg
gcgaccttctatccggtcgaccaggagacgactgaggatctcctcagtgaagcgtcggtc
cagacggcgcttcgtacgatctgtgacctctatggggaggaattcgacatcgatcccgac
gacaagggaatggagctcatgcagactatctcccaaatcgtccgcgataccgggatcctc
accggcgaggcagaggggcgtgattggcagcgagccttcgacggtatctgcgatcggctc
acgacaggcagcggtgaccggtacagccggcggtacagatatcgcgggtcgcaaggcaac
tggagtgcgcacgaggacgcacaggaccaactggacgaagccgcgacggcactactcgag
gggctccgccccgaggatcaggacttcatgggtggattggacaccgagtggaacagcagc
cactacgtgctgagtttggcccggctgtactgcaccgttctcggtgaatacgaggacacg
aaggcggatcagaacacgctcgattactacgacctcattcagacgaccatcgacttcttg
gaggcgaacgaccgggtctgtgaccagcttcgctctcagttcgagtatgtgatggtcgac
gagatgcaggacacagactcgcttcagtgggacctcgtcaaattgctcacggcggggaat
actgacgacttcgacgcgcagaacgtattcctcgtcggtgacgagaaacagagcgtctac
cggttccgtggcgccgatgtgaccacgttcgggtcggcgcgggctgatctcgacgcagcc
aatcctgacagcgtcgagacgaccaagcagctccgagggaacttccgcacaatcgcggag
acacgagagttcttgaatgcgttgttcgaccgggtgttcgagccgatggaggacgagtat
cgaccctacgaagctcgtccccaagcactcaccgacgagcgacgcgagggacgcgatatc
tccgggagcgtcgagtatctactcgtccctgacgacgacctcgcgcagttacatggcgac
gggtatctcgatgcaacccctcggttcgctggaaagggcgagcgcgaggcccacgcgctc
gccagccggctcacatcactattggacgatccaccggagatctatgaccggaaggaggag
acctgtcgcccagcgaagcccgaagacatcgccattctgctccgggcccgtactcgcctc
aaagaacacgagcgggcgctggatgcctacgacattccgtacaccgtcgtctccggtagc
gggttctgggatagccccgaaatcaccgcgctggtcaacctcctcacgttttttgagaac
ccgaccgacgacattgcactctacggggtcctcaggtcgccgctgttcggtgtcacggat
gagacgctggctcgcctccattcgccaaacgattcgctgtgggccgccttacagagggca
gatggagacctcggtgatgctgccgggctcctgaccgagtggcgacggctcgcggcggtc
accgacgacgtctcggctgacaccacggtcccgtgggggacgatgctctcccggattatc
gatgacaccggctatatcgctagcgtcggggcagacgaacgaccacgacaagccgcggtg
aacatcaacaagttccgtgaacagatccgggcttgggaagaaggcggggtgaagacggtg
tccgaactcctgacgcgcatcgaacgccggaaggagatcgagacgcacgccgacgaggcg
acaatccccgaggatgctgacggcgtccagatccgaacgatccactcagcgaaagggctc
gagttccccatcgtcgtcgtgcccgaggtgggaacggagttcaatttccagggcgatgtc
gacgagtacgggaaggtctatttggacgaacttgcggtcggggatggagacacggagccc
gttttgggtatgaaagcgccctcagctgacgatccatacgaccacgacgacacgctcgct
cggtcacggctccgggagcgagtcaagatgcaggagcgggcagaactcaaacggctgctc
tacgtcgctgcgacgcgagctcgtgatcacttgctcttcagcgggatccactctgtagaa
actgatgacgaagggagcctcgggctcaaggacgccagagatccggcggacgctcgctac
tggcgggactggttacagccaatcctcttggaggacgaggagggaaataccagtcacacc
ctcagtgctgttgcctcgacggctgaacacacgactgagctcgcggggaatcagtttact
attcggctgcccactgcccccgtggatgactgggatgactcgggcccgtcgactcatgag
taccccgaaatcgatatcccggagccggcgctgtccccggctcctgtgatgatgaccgcg
acgaacttcgcgaaggggcttgcccccgatgcgggagctatctacacggacgaacttgcg
gaagacgccgaagcggtggactcggacggcttacccgcgaaccatctcggcacgatcgtc
cacaaactcaccgaacaccgactcccgcgtgagcagtggcgaccggtggcgaggcgtctg
gcgagtgcgtttgatgagactgtaacggacgacgacctggcccggatcgagcgctatacg
gagcggtgtctccgattccgcgaacagcttgttgacgaggtgacgcctgagacgatccac
gaagagctcgccgtcgtcgctcgactggacagtggccggatcatcggtgatatcgacctg
ctgcttacgacaccagggacctaccatatcgccgattacaagacgaacgatactacccga
ctggcagtcgacgatctcgctgaaaagtattggccgcagctcgaatcatacgccgttgct
gtccaccagaacgatccttccaaggaggtacggctcacgctctacttcgcggatgcggat
gtctccaagacgaacacccttgatccgatgacgctcgatatcatgagtgacgatctcgat
tccaacctcttggagctcaccggggggatttcagacggtcctgaggatatcggatctggc
tactga
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