Haloplanus rubicundus CBA1113: DU500_17870
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Entry
DU500_17870 CDS
T05613
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DU500_17870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haj03021
]
DU500_17870
Transcription machinery [BR:
haj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DU500_17870
Prokaryotic type
Archaeal type
TFB
DU500_17870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
PRODH
Motif
Other DBs
NCBI-ProteinID:
AXG08341
UniProt:
A0A345E819
LinkDB
All DBs
Position
pCBA1113-02:complement(72476..73450)
Genome browser
AA seq
324 aa
AA seq
DB search
MSLRHVYERTFDEDVPSIERSRSGCPECGGLVHTNSIETACEDCGLVLEDRPIDHGPEWR
AFDETEGNERKRTGPPLTPTRHDHGLSSEIGFDQADANGSTLSGRKRSQVARLRREHQRG
RWSSKAEQNLAHGLSEVRRIVGALDLPRSLRDQACRLYRTAAHEDLIRGRSIEAMAAASV
SAACRCAGLPRTFTEVGTMAAVSDERVRNAYGVLNRELELPTVPMEPPEYVPKLTSELDV
SPATRQRAVDLAEQLASSGVASGCHPMGVAAGCVYQASLEHGERLTQESLADIAEVTPVT
LRARWKQLQSVLNESSNPHHRGDA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtcactacgacacgtctacgagcgaacgttcgacgaggacgtcccctccatcgaacgg
tccagaagcggttgtcccgagtgcggcggcctcgtccacacgaacagcatcgagacagcc
tgcgaggactgcgggctggtcctcgaggatcgccctatcgaccacggtccggagtggcgg
gcattcgacgagacggagggcaacgagcgcaagcgaaccgggccaccgctgacgccgacc
cgccatgaccacgggctttcgagtgagattggcttcgatcaggccgacgccaatggctcc
acgttatcaggtcggaaacggagccaggtcgcccgcctccggcgtgagcaccagcgtggg
cggtggtccagcaaggccgaacagaacctcgcgcatggtctctcggaggtgagacggatc
gtcggcgcactcgacctgccacggagtcttcgggatcaagcctgtcgactgtaccgaacc
gctgcccatgaggatctcatccgtggccggtcaatcgaggcgatggccgctgcgagcgtc
tctgctgcctgtcggtgtgccggcctcccccggacgttcacagaggtaggaacgatggcg
gctgtcagcgacgagcgcgtccggaacgcctatggcgtcctcaaccgggaactggagctg
ccgacagtaccgatggagcctcccgagtacgtcccgaagttgacgtcggaactcgatgtc
tcgccggcgactcggcagcgggccgtcgacctcgccgagcaattggcgagcagcggcgtt
gcaagtggctgtcatccgatgggcgtcgccgcgggctgtgtctatcaggcgtctctggag
catggcgaacggctaacccaggaatcgctcgccgatatcgccgaggtcacccccgtgacc
ctacgggcccgatggaaacaactccagtcagtgctcaacgagtcgagcaacccacaccat
cggggagacgcatga
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integrated database retrieval system
