Halomonas sp. KO116: KO116_01238
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Entry
KO116_01238 CDS
T03800
Name
(GenBank) transcriptional regulator, RpiR family
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
hak
Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hak03000
]
KO116_01238
Transcription factors [BR:
hak03000
]
Prokaryotic type
Helix-turn-helix
Other families
KO116_01238
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
RNB
PSII_Pbs31
HTH_24
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AJY49731
LinkDB
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Position
complement(1320171..1321034)
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AA seq
287 aa
AA seq
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MAHDLLDRLRERLEELNRSERKVANVILEDPTVATSLSIASLAQAASVSEPTVNRFCRNF
GAKGYPDFKIKLAQSLAGGTPYVTRAVEPGDTTTQYTQKIFGATIAALDEAQREIDMAAI
ERMVDYLTQAKQIHIFGLGASGAVAQDAQHKFFRFNLPVMAYIDVLMQRMVAAACHTGDV
VVIISYTGRTRELVDIARLARDAGAVVLGITAPNSPLAHECTATLEVATPEDTDHYMPMT
SRVIQLTLIDALATGVTLRRGEDFLPHLKKIKDSLRDTRFPVEKPGK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggctcatgacttacttgaccgcttacgcgaacgtttagaagaactcaaccgctcggag
cgtaaagtcgccaatgtaattcttgaagaccccacggtcgccacgagtcttagcattgcc
agtctggctcaagcagccagcgttagtgagcccaccgttaatcgtttttgtcgcaacttc
ggtgccaaaggctaccccgatttcaagataaagctagcccaaagcctggcgggtggcacg
ccctatgttacccgggccgtggagcctggcgacaccaccacccagtacactcaaaaaatc
tttggcgccactattgctgcgcttgatgaggctcagcgagaaatcgatatggctgccatc
gagcgcatggtcgactacctcacccaggcaaaacagatccatatttttggcttgggcgcg
tccggtgcggtggcccaggatgcccaacacaagttcttccgcttcaacctgccggtgatg
gcctacatcgatgtgctgatgcagcgcatggttgccgccgcctgccataccggtgatgtg
gtagtgattatttcgtacaccggccgtacccgggaactggtggatattgcccgcctggcg
agggatgccggagccgtggtgctgggcattaccgcgcccaattcgccgttagcacatgag
tgtactgccacgcttgaagtggcaacgcccgaagacaccgaccactacatgccgatgacc
tcgcgggtgatccaattgacgctgattgatgcactagccaccggggtgaccctgaggcgt
ggtgaagacttcttaccccatctcaagaaaatcaaagacagcctacgcgacacccgcttt
ccggtggaaaagcctggcaagtga
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