Halomonas sp. KO116: KO116_01246
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Entry
KO116_01246 CDS
T03800
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hak
Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hak03016
]
KO116_01246
Enzymes [BR:
hak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
KO116_01246
Transfer RNA biogenesis [BR:
hak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KO116_01246
Prokaryotic type
KO116_01246
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AJY49739
UniProt:
A0A0D5LZZ4
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All DBs
Position
1329928..1330962
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AA seq
344 aa
AA seq
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MINMPIWQRSLDPLFGPPKAGHYRAQPEDFWVDEQLDFTPEAHGEHLWLRVEKRNQSTLE
VAKLLSRLCDVTPRDIGYSGMKDRIAVTRQWLSVHLPGRDAPLDLEQSLNAQGITVVEQA
RHPRKLKRGVHRTNRFVLRLSGEAIASDDFISRWEALCQSGVPNYFGPQRFGHEGHNLQR
AEALLNRGWRKRDDRQGMMLSTARSFLFNELLSTRIADGTWTQPLAGDTLMLDGTQSVFH
IDATDATLQARAMALDVHPTGVLWGVGEPGQGDAASYEAYLQQQYPGLCSGLERSGVKQA
RRALRMRLLEPQLDWEAGAVRLSFALSRGSFATAVLGELIEISG
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgattaatatgcctatatggcagcgcagcttagaccctctgttcggcccgcctaaagcc
ggtcattaccgtgctcagccggaagacttctgggttgacgagcagcttgattttactccc
gaggcgcacggggagcacctgtggttgcgggttgaaaaacgcaaccaatccacgttagaa
gtggctaagttattaagtcggctttgtgacgtaacgccccgtgatattggttactccggg
atgaaggatcgcattgccgtgacccgccagtggctgagcgtgcatctgccagggcgcgat
gcgccgcttgacttagagcagtcgcttaatgcccagggcatcacggtggttgagcaggcg
cgccacccgcgtaagcttaagcgcggggttcaccgcactaatcgatttgtcttacgcctg
agcggtgaggccatagcaagcgacgactttatcagccgctgggaagcgctttgccagtcc
ggtgtgcccaactatttcggcccccagcgctttggtcacgaagggcataatctacagcgc
gcagaagcactacttaacagaggttggcgtaaacgggacgaccgtcaaggtatgatgctt
tctaccgcacgcagctttttgtttaacgaactgcttagcactcgcattgcggatggcact
tggacgcaacccctggcgggcgacaccttaatgctggacggcacgcaaagcgtgtttcat
atcgacgccaccgatgcgacgcttcaggcccgcgccatggcgctggatgtgcatccaacg
ggtgtgctctggggcgttggcgaacccggtcagggtgacgcggctagctatgaagcgtat
ttgcagcagcagtatcccggcttgtgtagtggcctggagcgcagcggggttaagcaggca
cgccgtgcgctgcggatgcggctactggaaccacagcttgattgggaagcaggcgccgta
cggctttcgtttgcgttgtctcgcggtagctttgctaccgctgtgcttggtgagctgata
gaaataagtggatag
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