Halomonas sp. KO116: KO116_02152
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Entry
KO116_02152 CDS
T03800
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hak
Halomonas sp. KO116
Pathway
hak03030
DNA replication
hak03430
Mismatch repair
hak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KO116_02152
03430 Mismatch repair
KO116_02152
03440 Homologous recombination
KO116_02152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hak03032
]
KO116_02152
03400 DNA repair and recombination proteins [BR:
hak03400
]
KO116_02152
Enzymes [BR:
hak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KO116_02152
DNA replication proteins [BR:
hak03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KO116_02152
DNA repair and recombination proteins [BR:
hak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KO116_02152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
GIY-YIG
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AJY50629
LinkDB
All DBs
Position
complement(2307090..2308478)
Genome browser
AA seq
462 aa
AA seq
DB search
MSETALIFVDVETTGTRATRDRITEIVALKVVNGELVDRWSSLIYPECKVPAQITQLTGI
RDDMLREAPRFTHIAESLREWLGDGQLVAHNARFDYSFLRNEFKRAGQDFRASLICTLRL
SRRIAPQERQHNLKALLNRYGISPIRHHRAGDDVDALWSLWQTWQVEHSEEAWQNLLGDE
RRHRTLPAHLDSAQLEGLPTCPGVYLFYGHNRLPLYVGKSVNLRSRVLGHFQHDHQDDKE
MRLAQQVQHIEWEETAGDLGAQLREAQLVKTLMPIMNRQLRKQRKLTTWHWEAEANHPEL
LSGSAMSLPISGALYGLFRNAREAKNTLRAVAEEQKLCPRVLGLEKGKGRCFANQVGKCL
GACHGQESIAQHTQRAKAALMQLQVNVWPWPGSIAIEEQTANSTAPAWHVVRRWCYLGSA
ASLNKAKTLADASASFDVDSYRILNRFLRSPEQHGLTVIPLG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaacagcattaatctttgtcgatgttgagaccaccggcacccgggcaacccgc
gaccgaattaccgaaatcgtcgccctgaaagtcgttaacggtgagctggttgatcgctgg
tcgagcttgatatacccagaatgtaaagtgcccgcgcaaatcacccagctcaccgggatt
cgtgacgatatgctgagagaggcgccacggtttacccacatcgccgaatcactacgtgag
tggcttggcgacgggcaactggttgctcacaatgcgcgctttgactacagctttttgcgc
aatgagtttaagcgcgcggggcaagattttcgcgcctcattgatatgcacgctgcgttta
tcgcggcggatagctccccaggagcgtcagcacaatctgaaagcgttacttaaccgctac
ggcatttcacctatccgccaccaccgggctggtgatgatgtggatgccctgtggtcactc
tggcaaacgtggcaagttgagcacagtgaagaagcatggcagaacctgctgggtgatgag
cgacgccaccgaacattgcccgcccatttagacagcgctcagcttgaagggctgcccacc
tgccctggcgtgtacctgttttacggtcacaatcggctgccgttgtatgtgggcaaaagc
gtcaatctacgcagccgcgtactaggccactttcagcatgatcaccaggacgataaagag
atgcgcctagctcagcaggtgcaacatatcgaatgggaggaaaccgctggcgatttaggc
gcccagttgcgtgaggcgcaactggtgaaaacgttaatgccgattatgaaccggcagcta
cgcaagcagcgcaagctgaccacctggcactgggaggcagaagccaaccacccggaactg
cttagcggaagtgccatgagcctgccaatcagtggcgcactgtacggtttgttccgcaat
gcacgagaggctaagaacacattaagagctgttgctgaagaacaaaagctctgcccgcga
gtactggggcttgaaaaaggtaagggccgctgttttgccaatcaggtgggtaagtgcctt
ggcgcctgtcatggccaggagtcgattgcacagcacactcagcgagccaaggcggcgctc
atgcagctacaggttaatgtgtggccctggccaggcagtattgccattgaagagcaaaca
gcgaatagcacagcgcctgcttggcacgtggttcgccgatggtgctacctgggcagtgcg
gcaagccttaacaaggccaaaaccctagccgatgcgtccgcaagctttgatgtagatagc
taccgtatattgaaccgctttttgcgttccccggaacaacatggcctaacggtcatcccg
ctcggttaa
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