Halomonas sp. KO116: KO116_02263
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Entry
KO116_02263 CDS
T03800
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hak
Halomonas sp. KO116
Pathway
hak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KO116_02263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hak03400
]
KO116_02263
Enzymes [BR:
hak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KO116_02263
DNA repair and recombination proteins [BR:
hak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KO116_02263
RecFOR pathway proteins
KO116_02263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_16
AAA_3
TIP49
AAA_14
nSTAND3
AAA_17
RNA_helicase
AAA_33
NB-ARC
Rad17
AAA_25
NACHT
ABC_tran
AAA_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AJY50738
UniProt:
A0A0D5M4M0
LinkDB
All DBs
Position
complement(2407884..2408921)
Genome browser
AA seq
345 aa
AA seq
DB search
MLEHDRLIAAEPEQGEGRIDYAIRPKRLDDYIGQPRVREQLEIFIGAARLREESLDHTLV
FGPPGLGKTTLAHIIATEMGVGMKSTSGPVLERAGDLAAMLTNLEPGDVLFIDEIHRLSP
VVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPRFTLVGATTRAGLLTSPLRDRFGIVQR
LEFYNLEELTEIVSRSARLMGVKTSHEGAVEVAKRSRGTPRIANRLLRRVRDYAEMKGDG
VVDVAMADAALNMLNVDHHGLDHMDRRLLLAMIEKFDGGPVGIDSLAAAISEERDTIEDV
IEPYLIQQGLIMRTPRGRVVTRQAWLHFERVPHEQATDMEGERRP
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgctagaacacgaccggctgatcgccgctgaacctgaacaaggagaggggcgcattgac
tacgctattcgccctaagcggttggatgactatattggccagccgcgtgtgcgtgaacag
ctggaaatttttatcggcgccgcaaggctgcgcgaagagagcctggatcataccctggta
tttggcccccctgggctaggtaaaacgacgctcgcgcatattattgccaccgaaatgggg
gtcggcatgaagtcgacttccggcccggtactagagcgggcgggggacctcgccgccatg
ctgacgaatctagagcctggcgacgtactttttatcgatgagattcaccgcctgtcaccc
gtcgtcgaagaagtgctttaccccgccatggaagatttccagctggatatcatgattggc
gagggcccggccgcgcgctctatcaagctggacttgccccgttttaccctggtgggcgcg
accacccgagcagggttgctgacctcaccgctgcgcgaccgcttcggtattgttcagcgg
cttgagttttataacctcgaagagctgaccgaaattgtgtcgcgatcggctcgcctaatg
ggcgttaagaccagtcatgaaggggcagttgaggtggccaagcgctcacgtggaacgccg
cgaattgccaaccggctattgcgtcgagtgcgtgattacgccgaaatgaaaggtgacggc
gttgtcgatgtcgccatggctgatgccgcgcttaatatgctcaacgttgatcatcatgga
ttggatcacatggaccgccggttattgctggcaatgatcgaaaaattcgatggtggccct
gtgggcattgattcacttgccgctgccattagtgaagagcgcgacaccattgaagatgtg
atcgagccgtatcttattcaacaaggcttgattatgcgcacgccgcgtggccgtgtcgtt
acccgccaagcgtggctgcactttgagcgagtaccccatgaacaggcaaccgatatggaa
ggggagcgccgtccgtga
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