Halomonas sp. KO116: KO116_02264
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Entry
KO116_02264 CDS
T03800
Name
(GenBank) Holliday junction ATP-dependent DNA helicase ruvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
hak
Halomonas sp. KO116
Pathway
hak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KO116_02264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hak03400
]
KO116_02264
DNA repair and recombination proteins [BR:
hak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KO116_02264
RecFOR pathway proteins
KO116_02264
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
HHH
RecR_HhH
IMS_HHH
Transposase_20
HHH_8
Cdd1
Motif
Other DBs
NCBI-ProteinID:
AJY50739
LinkDB
All DBs
Position
complement(2408990..2409598)
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AA seq
202 aa
AA seq
DB search
MIGRLSGQLLAKQPPWIVIDVHGVGYELETSMNTLVALPAVGENASLFTHLTIRDDAHLL
YGFGREHERALFRALIKVNGVGPKLALAILSGMDEDAFMRCVRDDDSKALTTLPGVGKKT
AERLIIEMRDRFPEWEDGSNALLPLEAANGRASSRDSLADAEAALVSLGYKLTEAAKMLA
DIDPNQSTESLIKAALTQRMSG
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgattggacgtctgagtggccagttattggcaaagcaacctccttggatagtgatcgac
gtacatggcgtaggctatgagctggaaacgtcaatgaataccctggtggcacttcccgcc
gtcggcgaaaatgcctctctgttcacccacctcactattcgtgacgacgcccatctgctg
tatggtttcggcagagagcatgagcgcgccttatttcgagccttgattaaggtcaacggt
gtagggcctaagcttgctttagcgattttgtcggggatggatgaagacgcctttatgcgc
tgcgtgcgtgacgatgacagtaaagcactgacaaccctgccaggtgtgggtaagaaaacc
gctgagcggctgattattgaaatgcgcgatcgcttccctgagtgggaagacggtagcaat
gcgttactgcctcttgaggccgctaatggtcgagcatcttctcgcgatagccttgccgat
gcagaagcggcgttagtcagcttgggctataaactcactgaagcagccaaaatgcttgcc
gatatcgaccccaatcagtcaaccgagtcgctgattaaggctgccctgactcaacgtatg
agcggctaa
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