KEGG   Halomonas sp. KO116: KO116_02587
Entry
KO116_02587       CDS       T03800                                 
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
hak  Halomonas sp. KO116
Pathway
hak03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hak00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    KO116_02587
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hak03019]
    KO116_02587
   03009 Ribosome biogenesis [BR:hak03009]
    KO116_02587
   03036 Chromosome and associated proteins [BR:hak03036]
    KO116_02587
Enzymes [BR:hak01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     KO116_02587
Messenger RNA biogenesis [BR:hak03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     KO116_02587
Ribosome biogenesis [BR:hak03009]
 Eukaryotic type
  90S particles
   RNase
    KO116_02587
 Prokaryotic type
  rRNA processing factors
   KO116_02587
Chromosome and associated proteins [BR:hak03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     KO116_02587
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: AJY51062
LinkDB
Position
complement(2774336..2775028)
AA seq 230 aa
MSNSLNAFCRRIGHTFGDDTLLELALTHRSFGGRNNERLEFLGDSIVNFVIAEALFQRFP
QAREGQLSRLRARLVKGQTLAELAREMEFGECLRLGSGEMKSGGHRRESILADAVEAIIG
AIYLDAGMDVVRDRVLDWYAERLENISLQDTQKDPKTRLQEFLQSRQAALPRYEVVCVKG
EAHAQTFTVECYIDLLVEHTTGKGPSRRHAEQQAAEEALSYLEKSPGEKS
NT seq 693 nt   +upstreamnt  +downstreamnt
gtgagtaattccctgaacgctttttgccgacgaatcggccatacctttggcgacgatacg
ctattggaattggccttgacccaccgaagcttcggtggtcgtaacaatgagcgcctggaa
ttcctgggtgactccattgtcaatttcgtgatcgccgaggcgctgtttcaacgcttcccc
caggctcgtgaaggtcagctctcacgcctgcgtgcgcggttggtgaaaggccaaacgctg
gcggagcttgcccgggaaatggagttcggtgagtgcttgcggctaggctctggtgagatg
aaaagcggtggacatcgccgtgaatcgatcctggcggatgcggttgaagccatcattggt
gctatctatctggatgccggtatggatgtggtgcgtgaccgtgtattggattggtatgca
gagcgattggaaaatatctcgttgcaagatacccaaaaggaccccaaaacgcggttgcag
gagtttttgcagtcgcgtcaagccgccttgccgcgctatgaagttgtctgcgtgaagggc
gaggcgcatgcccagacctttaccgtggagtgctacattgacctgctggttgagcatacc
actggtaaaggtcctagccgccgtcatgctgaacagcaagcagcagaagaagcactgtcg
tacctcgaaaaaagccctggagaaaaatcatga

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