Halomonas sp. KO116: KO116_02600
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Entry
KO116_02600 CDS
T03800
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hak
Halomonas sp. KO116
Pathway
hak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KO116_02600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hak03400
]
KO116_02600
Enzymes [BR:
hak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KO116_02600
DNA repair and recombination proteins [BR:
hak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KO116_02600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AJY51075
UniProt:
A0A0D5M4C3
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All DBs
Position
2788765..2789592
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AA seq
275 aa
AA seq
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MRLVSFNINGIRARLHQLQALIDTQQPDVIGLQETKVQNSEFPIADVEAMGYHVFYHGQK
GHYGVALLCRQAPQEVFYGFPDDDEDAQCRMIGVRLVAEDGEAVTVWNGYFPQGENVTHP
TKFPNKERFYGQLARLLNERYRPDERLAIMGDFNISPEDQDIGIGEANRKRWLREGKTSF
QPIERKWLEGIKAWGLTDSYRISYPQSDDRFSWFDYRSKGFNQEPKRGLRIDYILVTKAL
AEQATGAGIDYDLRGMERPSDHAPTWSDFALTLKP
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctggtttcgttcaacattaatggcatccgagcacggcttcaccaattacaggcg
ttgatcgatactcagcagccggacgtaattggacttcaggaaaccaaggtgcagaatagc
gagttcccgatcgccgacgtggaagccatgggttaccacgtcttttatcacggccaaaaa
ggccactacggggttgccttactgtgccgtcaggcacctcaagaagtgttttatggcttt
cccgatgatgatgaagacgcccagtgccgcatgatcggcgttcgcctagtcgcggaagat
ggggaagccgtgacggtatggaacggctatttccctcagggcgaaaacgttacccatccc
actaagtttcccaacaaagagcgcttttatggccagctagcacggctgctcaacgagcgg
taccgccctgacgagcggctagccatcatgggcgattttaatatatcgccggaagaccag
gacattggcatcggcgaggccaaccgcaagcgctggctgcgtgaaggcaaaaccagcttt
caacccattgagcgcaaatggctcgaaggcatcaaagcgtgggggcttaccgacagctat
cgcatcagctatccgcaaagcgatgaccgctttagctggtttgactaccgctcaaaaggg
tttaaccaggagcccaagcgtggcctgcgcatcgactatattctcgtcaccaaggcgcta
gccgagcaggccaccggcgcaggcattgactacgacctgcgcggcatggaacgcccctct
gatcacgcccccacctggagtgacttcgctcttacgcttaagccgtag
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