Halomonas sp. KO116: KO116_02902
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Entry
KO116_02902 CDS
T03800
Name
(GenBank) Periplasmic binding protein domain
KO
K10439
ribose transport system substrate-binding protein
Organism
hak
Halomonas sp. KO116
Pathway
hak02010
ABC transporters
hak02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KO116_02902
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
KO116_02902
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hak02000
]
KO116_02902
Transporters [BR:
hak02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
KO116_02902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Peripla_BP_6
Peripla_BP_3
PrpR_N
ANF_receptor
FliG_N
Motif
Other DBs
NCBI-ProteinID:
AJY51375
LinkDB
All DBs
Position
complement(3106828..3107766)
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AA seq
312 aa
AA seq
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MFKKTTLAASVIMMSITTAQAEGPYRIGITQNNVGVDSYQTTYESAFEAAAEEAGNVDIV
VLDAGGDVARQIGQMQDLIQQQVDAIIIWPTNGQAVIPAIRQAHQAGIPVVVTNSKIAEA
GLEFIAAFSGPDNVQQGIASAEMMCDALGGEGQIVQIAGQPGYTTAMERATGFEVRLAEA
CPGVELLETQPGNWNRERAQRVMEDFLTKYDRIDGVYSGDDNMGVGALNAAKGADRADEI
IFIGATNFAVGYDAIERGEYYGSIYQSPVDDAEAALQTALDVLAGEEVPKMNFFETPKIT
AENLSEFDRPVF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaaccactcttgccgcctctgtcatcatgatgtccatcacaacagcgcag
gctgaaggcccttaccgcatcggcattactcaaaacaacgtgggtgtggatagctatcaa
acgacctatgaaagtgcgtttgaagctgctgctgaagaggcaggcaacgttgatattgtg
gtgttagatgccggcggtgatgtcgctcgtcagattggtcaaatgcaggatcttatccag
cagcaagtcgatgccattatcatttggccaaccaatgggcaggccgtaattcctgctatt
cgtcaggctcatcaggcgggcattcctgtcgtcgtgactaattccaaaattgctgaagcg
ggtcttgaattcatcgctgccttttcaggcccagataatgttcagcaaggcattgcctct
gcggaaatgatgtgtgatgccctcgggggcgaagggcagatcgtgcagattgctggccag
ccgggctacaccaccgccatggagcgagcgaccggtttcgaggtgcgtcttgctgaagct
tgccctggtgtagagctgctggagacgcagcccggtaactggaaccgtgagcgggctcag
cgggtgatggaagatttcctgactaaatatgaccgtattgacggcgtttattccggcgat
gacaacatgggggtcggcgcattgaatgcggcgaaaggcgctgatcgtgccgatgagatt
atcttcattggtgccacgaatttcgccgttggttacgacgcgattgagcgtggcgagtat
tacggttctatctatcagtctcccgtagatgatgcggaagccgccctacaaacggctttg
gatgtgttagccggagaagaagtgccgaagatgaacttctttgagacacccaagatcact
gctgaaaacctgagcgagttcgatcgtcccgttttctga
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