Halomonas sp. KO116: KO116_02973
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Entry
KO116_02973 CDS
T03800
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
hak
Halomonas sp. KO116
Pathway
hak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KO116_02973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hak03019
]
KO116_02973
Messenger RNA biogenesis [BR:
hak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KO116_02973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AJY51446
LinkDB
All DBs
Position
complement(3197873..3198379)
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AA seq
168 aa
AA seq
DB search
MKVMSVIDADGFRPNVGIIIANSQGQLLWARRVGQNAWQFPQGGINASETPQQALFRELY
EEIGLTAGDVDIVACTRGWLRYRLPRRMIRTHSRPVCIGQKQKWFLLKIRCQESQICMTA
TPTPEFDGWRWVSYWYPLGQVVPFKREVYRRALRELSPRAQRLAQDDD
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgatgtccgtgatcgacgctgacggctttcgccccaatgttggcattatcatt
gccaacagccaggggcagctgctttgggcgcgtcgggtaggacaaaatgcgtggcaattt
ccccaggggggcatcaatgcaagcgagacgccacaacaagcactttttcgtgagctttac
gaagagatcggcttaaccgccggtgatgttgatattgttgcctgcacccggggctggcta
cgctaccgtctgccacgacgcatgattcgcacacattcgcgtccggtctgcataggccag
aagcaaaagtggtttttacttaaaatccgttgccaggaaagccaaatctgtatgacggca
accccaacacctgaatttgatgggtggcggtgggtgagctactggtacccgctagggcag
gtagtaccttttaaaagagaggtgtatcggcgcgcgttgcgagaattgtctccccgcgct
cagcgcctggcacaggatgacgattag
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