Halomonas sp. KO116: KO116_03017
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Entry
KO116_03017 CDS
T03800
Name
(GenBank) transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
hak
Halomonas sp. KO116
Brite
KEGG Orthology (KO) [BR:
hak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hak03000
]
KO116_03017
Transcription factors [BR:
hak03000
]
Prokaryotic type
Helix-turn-helix
LysR family
KO116_03017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AJY51490
UniProt:
A0A0D5M5I7
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Position
3246975..3247859
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AA seq
294 aa
AA seq
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MNPSIQQLRVFIAVAHSRSLAEASERVHLSQPAISIALRKLEENVGGALFARTSRQLVLT
PEGDAFLPVAVRLLNDWNEAFEDLNDQFSKQRGKVTIAALPTLAAGLFPQVIRLFHEAYP
RINLSLHDVLAEQINQMVREGRADLGLSVPPGDADDLTFEPVLEDSYVAVCPCGHPLLAQ
PAVAWGQLAAYPFIGINRLSSSRQDIDRIMQSVGERLDILCDARQIATVGRMVAAGLGIS
VLPSLSFRQIATDGIAHRPLVEPTIRRELGMILSRRHPPSAAASALCQLIRDHE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaagcatccagcagttgcgcgtttttattgccgtcgcccactcgcgcagcctt
gcggaggccagcgagcgagtacacctttcccaaccggcgatttcgattgcactacgcaaa
ctggaagagaacgtaggcggtgcgctatttgcccgcacatcacgccagcttgtcttgacc
ccggaaggcgacgctttcctaccggttgccgtgcggttgttaaatgactggaacgaagct
tttgaggatctcaacgaccagttttccaagcagcgcggcaaggtaacgatcgccgcctta
cccaccctggcagcgggcttgttcccgcaggtcatccggcttttccacgaggcttacccc
cgtatcaacctcagcctgcacgatgtgctggccgaacagatcaaccagatggtgcgcgaa
ggccgtgccgacctggggctttccgtacctcccggtgacgcagatgacctcacgtttgaa
cccgtgctcgaagatagctacgtggcagtttgcccttgcgggcacccactgctggcacaa
ccggcagtggcgtgggggcagctcgccgcctacccgtttatcggcatcaatcgtctttcc
agttcacgccaggatattgaccgcattatgcagagcgtcggggaacggctggatatcttg
tgcgatgcccgccagatcgctaccgtcggccgcatggtggcggcgggcttgggtattagc
gtgctgccctcactcagctttcgccagattgccaccgatggcattgcacaccgcccactg
gtcgaaccgactatccgtcgcgagctgggcatgatattgagccgacgacaccccccttcc
gccgccgccagcgccctgtgccaactgattcgtgatcacgaatga
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